RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 ELMOD3Q96FG2 381 aa3.81□□□□□ -1.8
MDM2-216ENST00000471946 SMC6Q96SB8 1091 aa3.81□□□□□ -1.8
MDM2-216ENST00000471946 GAD1Q99259 594 aa3.81□□□□□ -1.8
MDM2-216ENST00000471946 SRSF8Q9BRL6 282 aaKnown RBP3.81□□□□□ -1.8
MDM2-216ENST00000471946 GHITMQ9H3K2 345 aa3.81□□□□□ -1.8
MDM2-216ENST00000471946 SMARCAD1Q9H4L7 1026 aa3.81□□□□□ -1.8
MDM2-216ENST00000471946 PLSCR4Q9NRQ2 329 aa3.81□□□□□ -1.8
MDM2-216ENST00000471946 FBXL2Q9UKC9 423 aa3.81□□□□□ -1.8
MDM2-216ENST00000471946 POU2F3Q9UKI9 436 aa3.81□□□□□ -1.8
MDM2-216ENST00000471946 SESN1Q9Y6P5 492 aa3.81□□□□□ -1.8
MDM2-216ENST00000471946 NOTCH4Q99466 2003 aa3.81□□□□□ -1.8
MDM2-216ENST00000471946 A6NCN8 305 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 IFITM10A6NMD0 228 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 ANKRD28O15084 1053 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 HS6ST1O60243 411 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 GPC4O75487 556 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 DAB1O75553 588 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 HIST1H2ABP04908 130 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 HIST1H2ADP20671 130 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 ACADLP28330 430 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 GARSP41250 739 aaKnown RBP3.8□□□□□ -1.8
MDM2-216ENST00000471946 MRPS34P82930 218 aaKnown RBP3.8□□□□□ -1.8
MDM2-216ENST00000471946 ILF3Q12906 894 aaKnown RBP eCLIP3.8□□□□□ -1.84e-29■■□□□ 13.2
MDM2-216ENST00000471946 IKQ13123 557 aaPredicted RBP3.8□□□□□ -1.8
MDM2-216ENST00000471946 MAD2L1Q13257 205 aaPredicted RBP3.8□□□□□ -1.8
MDM2-216ENST00000471946 IRAK1BP1Q5VVH5 260 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 FAM205BPQ63HN1 556 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 ITPRIPL1Q6GPH6 555 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 TRNP1Q6NT89 227 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 C18orf65Q6ZTR6 163 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 ZNF771Q7L3S4 317 aaPredicted RBP3.8□□□□□ -1.8
MDM2-216ENST00000471946 HIST3H2AQ7L7L0 130 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 TSPAN33Q86UF1 283 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 GPR180Q86V85 440 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 EXOC3L1Q86VI1 746 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 TICAM1Q8IUC6 712 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 MAP7D3Q8IWC1 876 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 RASGEF1CQ8N431 466 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 OR1J2Q8NGS2 313 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 BBS10Q8TAM1 723 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 LNX1Q8TBB1 728 aaPredicted RBP3.8□□□□□ -1.8
MDM2-216ENST00000471946 CD101Q93033 1021 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 PIGTQ969N2 578 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 QRFPRQ96P65 431 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 SEMA3CQ99985 751 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 SDF4Q9BRK5 362 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 PLK3Q9H4B4 646 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 MAGIXQ9H6Y5 334 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 EVA1AQ9H8M9 152 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 ZNF556Q9HAH1 456 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 EBF2Q9HAK2 575 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 EPB41L5Q9HCM4 733 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 TBC1D22BQ9NU19 505 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 UBA2Q9UBT2 640 aaPredicted RBP3.8□□□□□ -1.8
MDM2-216ENST00000471946 FBXL17Q9UF56 701 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 ZNF215Q9UL58 517 aaPredicted RBP3.8□□□□□ -1.8
MDM2-216ENST00000471946 NENFQ9UMX5 172 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 AMDHD2Q9Y303 409 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 OR2W1Q9Y3N9 320 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 PCDHAC2Q9Y5I4 1007 aa3.8□□□□□ -1.8
MDM2-216ENST00000471946 FSD2A1L4K1 749 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 EME2A4GXA9 379 aaPredicted RBP3.79□□□□□ -1.8
MDM2-216ENST00000471946 EIF4E1BA6NMX2 242 aaKnown RBP3.79□□□□□ -1.8
MDM2-216ENST00000471946 A8MZ25 164 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 HS3ST1O14792 307 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 VILLO15195 856 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 PLPP2O43688 288 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 GABRB1P18505 474 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 GNL1P36915 607 aaPredicted RBP3.79□□□□□ -1.8
MDM2-216ENST00000471946 CAMPP49913 170 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 GAS1P54826 345 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 COG7P83436 770 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 TFAP4Q01664 338 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 POU3F1Q03052 451 aaPredicted RBP3.79□□□□□ -1.8
MDM2-216ENST00000471946 LMOD3Q0VAK6 560 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 GTF2H2Q13888 395 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 PDE1CQ14123 709 aaPredicted RBP3.79□□□□□ -1.8
MDM2-216ENST00000471946 IRF3Q14653 427 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 KRTCAP3Q53RY4 240 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 GTF2H2CQ6P1K8 395 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 TMEM154Q6P9G4 183 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 RAD9BQ6WBX8 426 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 CFAP77Q6ZQR2 320 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 ASB18Q6ZVZ8 466 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 ATG9AQ7Z3C6 839 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 KMT5CQ86Y97 462 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 TEX11Q8IYF3 940 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 ADGRF2Q8IZF7 708 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 UTP15Q8TED0 518 aaKnown RBP3.79□□□□□ -1.8
MDM2-216ENST00000471946 SLC44A1Q8WWI5 657 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 SYT17Q9BSW7 474 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 KRTAP1-5Q9BYS1 174 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 TMEM39BQ9GZU3 492 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 SIL1Q9H173 461 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 HAUS2Q9NVX0 235 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 DONSONQ9NYP3 566 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 STK39Q9UEW8 545 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 FBXW11Q9UKB1 542 aa3.79□□□□□ -1.8
MDM2-216ENST00000471946 KANSL1LA0AUZ9 987 aa3.78□□□□□ -1.8
MDM2-216ENST00000471946 ASPDHA6ND91 283 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms