RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 GLI2P10070 1586 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FAM237BA0A1B0GVD1 139 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 A8MUA0 341 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CLDN4O14493 209 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 LDOC1O95751 146 aaPredicted RBP13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PRKCHP24723 683 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ADRA1DP25100 572 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ASMTP46597 345 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 C2orf80Q0P641 193 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 HYAL2Q12891 473 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PPP2R2DQ66LE6 453 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PIGZQ86VD9 579 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OR4L1Q8NH43 312 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 BRF2Q9HAW0 419 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CHST7Q9NS84 486 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SAMD4AQ9UPU9 718 aaKnown RBP13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FAM86C2PA6NEL3 165 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PLIN3O60664 434 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OR4Q2P0C623 313 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 EPHA3P29320 983 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CREMQ03060 361 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 HSPB3Q12988 150 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 AMIGO2Q86SJ2 522 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 GALNT13Q8IUC8 556 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ZNF527Q8NB42 609 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 HBEGFQ99075 208 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PHPT1Q9NRX4 125 aaPredicted RBP13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ZNF490Q9ULM2 529 aaPredicted RBP13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PRKAA2P54646 552 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 IL18R1Q13478 541 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RHBDF2Q6PJF5 856 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 COQ8AQ8NI60 647 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 S100ZQ8WXG8 99 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 STRA6Q9BX79 667 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SPATA31A5Q5VU36 1347 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SPATA31A7Q8IWB4 1347 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TOB1P50616 345 aaPredicted RBP13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DGKEP52429 567 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SMIM11AP58511 58 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 GOLGA2P5Q9HBQ8 144 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SEMA3GQ9NS98 782 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 A0A0A0MRY4 1105 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 C15orf38-AP3S2A0A0A6YYH1 394 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DDX3YO15523 660 aaKnown RBP13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 VARSP26640 1264 aaKnown RBP13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SP2Q02086 613 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DNASE1L3Q13609 305 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TLR1Q15399 786 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ARPINQ7Z6K5 226 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ZFPM1Q8IX07 1006 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 AMER2Q8N7J2 671 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SLC43A3Q8NBI5 491 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OR2L8Q8NGY9 312 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SLC22A8Q8TCC7 542 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RADILQ96JH8 1075 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SPATA13Q96N96 652 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MECRQ9BV79 373 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PNO1Q9NRX1 252 aaKnown RBP13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ASTN2O75129 1339 aaPredicted RBP13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SUV39H1O43463 412 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OTCP00480 354 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MSANTD2Q6P1R3 559 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 LDB1Q86U70 411 aaPredicted RBP13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CRYBG2Q8N1P7 616 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 LRRC17Q8N6Y2 441 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SLC47A1Q96FL8 570 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PPP3R2Q96LZ3 170 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ALG2Q9H553 416 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 KIAA1522Q9P206 1035 aaPredicted RBP13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OR1F1O43749 312 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TRBC1P01850 177 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 YAP1P46937 504 aaKnown RBP13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TEAD4Q15561 434 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RBFAQ8N0V3 343 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ZNF366Q8N895 744 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SHC3Q92529 594 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RPL10LQ96L21 214 aaKnown RBP13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PARPBPQ9NWS1 579 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DUS2Q9NX74 493 aaKnown RBP13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PCP4L1A6NKN8 68 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ATP6V1G2O95670 118 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CAPGP40121 348 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TSPAN5P62079 268 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SLC34A1Q06495 639 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 LYPLAL1Q5VWZ2 237 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 KYAT3Q6YP21 454 aaKnown RBP13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 NAT14Q8WUY8 206 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SNX33Q8WV41 574 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MYDGFQ969H8 173 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CORO2BQ9UQ03 480 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FGBP02675 491 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FAM153BP0C7A2 387 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CORO1AP31146 461 aaKnown RBP13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SLC6A9P48067 706 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SNAPC1Q16533 368 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 BMT2Q1RMZ1 405 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FAM153CQ494X1 144 aa13.17□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 BEND7Q8N7W2 519 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms