RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 GRIP2Q9C0E4 1043 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 TTYH1Q9H313 450 aaPredicted RBP8.53□□□□□ -1.04
CD47-204ENST00000471694 SLAMF7Q9NQ25 335 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 INSL5Q9Y5Q6 135 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 DNMT3AQ9Y6K1 912 aaPredicted RBP8.53□□□□□ -1.04
CD47-204ENST00000471694 INSIG1O15503 277 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 MMP20O60882 483 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 CYP17A1P05093 508 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 RHOP08100 348 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 ERCC2P18074 760 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 EN2P19622 333 aaPredicted RBP8.53□□□□□ -1.04
CD47-204ENST00000471694 C2orf80Q0P641 193 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 EML3Q32P44 896 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 TXNDC11Q6PKC3 985 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 SCIMPQ6UWF3 145 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 GPRIN3Q6ZVF9 776 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 VANGL1Q8TAA9 524 aaPredicted RBP8.53□□□□□ -1.04
CD47-204ENST00000471694 LRRC39Q96DD0 335 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 IKZF2Q9UKS7 526 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 NCANO14594 1321 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 REM1O75628 298 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 NUDT17P0C025 328 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 BGNP21810 368 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 SLC11A1P49279 550 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 ARFIP1P53367 373 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 MAPK12P53778 367 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 NAB1Q13506 487 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 SLC29A2Q14542 456 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 PRRT3Q5FWE3 981 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 TATDN1Q6P1N9 297 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 MED27Q6P2C8 311 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 C1orf186Q6ZWK4 172 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 ZNF527Q8NB42 609 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 WASF2Q9Y6W5 498 aa8.53□□□□□ -1.04
CD47-204ENST00000471694 CIB4A0PJX0 185 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 EIF3HO15372 352 aaKnown RBP eCLIP8.52□□□□□ -1.05
CD47-204ENST00000471694 GSC2O15499 205 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 RPP40O75818 363 aaKnown RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 SOD2P04179 222 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 GLI1P08151 1106 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 IRF2P14316 349 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 ETS1P14921 441 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 JUNDP17535 347 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 AIF1P55008 147 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 CBX3Q13185 183 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 CRY2Q49AN0 593 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 ALG1LQ6GMV1 187 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 POLNQ7Z5Q5 900 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 COX18Q8N8Q8 333 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 IFT80Q9P2H3 777 aaPredicted RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 BTRCQ9Y297 605 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 SDC3O75056 442 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 PRKCGP05129 697 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 MSX1P28360 303 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 CCNFP41002 786 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 AP1S1P61966 158 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 PURAQ00577 322 aaKnown RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 PTCRAQ6ISU1 281 aaPredicted RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 DUS1LQ6P1R4 473 aaKnown RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 OR5B17Q8NGF7 314 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 TSEN15Q8WW01 171 aaKnown RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 EZH1Q92800 747 aaPredicted RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 EMID1Q96A84 441 aaPredicted RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 PNPLA2Q96AD5 504 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 SLC25A36Q96CQ1 311 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 ZMAT2Q96NC0 199 aaKnown RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 TOR4AQ9NXH8 423 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 CACNG4Q9UBN1 327 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 CENPXA8MT69 81 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 PSMD9O00233 223 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 AKAP8O43823 692 aaKnown RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 FAM228BP0C875 321 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 ZNF823P16415 610 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 CXCL12P48061 93 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 ZNF41P51814 821 aaPredicted RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 ARHGDIBP52566 201 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 AQP5P55064 265 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 GTF2BQ00403 316 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 SPIBQ01892 262 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 MAPK7Q13164 816 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 TBCELQ5QJ74 424 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 NOXRED1Q6NXP6 359 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 ZNF549Q6P9A3 640 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 STRADAQ7RTN6 431 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 ZNF571Q7Z3V5 609 aaPredicted RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 TGM7Q96PF1 710 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 MAGEH1Q9H213 219 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 ADAMTS10Q9H324 1103 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 SNX7Q9UNH6 387 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 CCT8L1PA6NM43 557 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 LEFTY2O00292 366 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 RGS20O76081 388 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 CTDNEP1O95476 244 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 LAMP2P13473 410 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 TOP3AQ13472 1001 aaPredicted RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 NR0B2Q15466 257 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 LRRTM4Q86VH4 590 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 CAND1Q86VP6 1230 aaKnown RBP8.52□□□□□ -1.05
CD47-204ENST00000471694 OR8H2Q8N162 312 aa8.52□□□□□ -1.05
CD47-204ENST00000471694 OR2L5Q8NG80 312 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms