RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 MRPL57Q9BQC6 102 aaKnown RBP17.39■□□□□ 0.37
HSPG2-208ENST00000471322 TPSD1Q9BZJ3 242 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 SLC6A17Q9H1V8 727 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 KCNH6Q9H252 994 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 MTG2Q9H4K7 406 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 THAP10Q9P2Z0 257 aaPredicted RBP17.39■□□□□ 0.37
HSPG2-208ENST00000471322 ERVW-1Q9UQF0 538 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 CFAP54Q96N23 3096 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 A0A1W2PQF6 199 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 PIGNO95427 931 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 ATP5BP06576 529 aaKnown RBP17.38■□□□□ 0.37
HSPG2-208ENST00000471322 DLDP09622 509 aaKnown RBP17.38■□□□□ 0.37
HSPG2-208ENST00000471322 FGF3P11487 239 aaPredicted RBP17.38■□□□□ 0.37
HSPG2-208ENST00000471322 PPARGP37231 505 aaPredicted RBP17.38■□□□□ 0.37
HSPG2-208ENST00000471322 CCDC15Q0P6D6 951 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 SETDB1Q15047 1291 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 LACTB2Q53H82 288 aaPredicted RBP17.38■□□□□ 0.37
HSPG2-208ENST00000471322 RBM20Q5T481 1227 aaKnown RBP17.38■□□□□ 0.37
HSPG2-208ENST00000471322 ZYG11AQ6WRX3 759 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 TRMT11Q7Z4G4 463 aaKnown RBP17.38■□□□□ 0.37
HSPG2-208ENST00000471322 LDB1Q86U70 411 aaPredicted RBP17.38■□□□□ 0.37
HSPG2-208ENST00000471322 CACUL1Q86Y37 369 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 KCNV2Q8TDN2 545 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 PPP4R1Q8TF05 950 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 KCTD4Q8WVF5 259 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.38■□□□□ 0.37
HSPG2-208ENST00000471322 ECHDC3Q96DC8 303 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 LYSMD1Q96S90 227 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 NDNQ99608 321 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 SIKE1Q9BRV8 207 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 CCDC68Q9H2F9 335 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 SUV39H2Q9H5I1 410 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 ZFYVE1Q9HBF4 777 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 GPAMQ9HCL2 828 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 NPHS2Q9NP85 383 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 INVSQ9Y283 1065 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 RRP15Q9Y3B9 282 aaKnown RBP17.38■□□□□ 0.37
HSPG2-208ENST00000471322 PPIL1Q9Y3C6 166 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 SDK1Q7Z5N4 2213 aa17.38■□□□□ 0.37
HSPG2-208ENST00000471322 CAPN8A6NHC0 703 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 G3V2L1 256 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 TRIM13O60858 407 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 EPHX1P07099 455 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 SRPRAP08240 638 aaKnown RBP17.37■□□□□ 0.37
HSPG2-208ENST00000471322 RBP1P09455 135 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 LTA4HP09960 611 aaKnown RBP17.37■□□□□ 0.37
HSPG2-208ENST00000471322 CTPS1P17812 591 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 MC4RP32245 332 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 CCNHP51946 323 aaPredicted RBP17.37■□□□□ 0.37
HSPG2-208ENST00000471322 DGKEP52429 567 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 POLR2LP62875 67 aaKnown RBP17.37■□□□□ 0.37
HSPG2-208ENST00000471322 LRRC8EQ6NSJ5 796 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 STK40Q8N2I9 435 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 C10orf82Q8WW14 230 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 GPR78Q96P69 363 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 TTC1Q99614 292 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 OLFM1Q99784 485 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 MRPL46Q9H2W6 279 aaKnown RBP17.37■□□□□ 0.37
HSPG2-208ENST00000471322 ACTR5Q9H9F9 607 aaPredicted RBP17.37■□□□□ 0.37
HSPG2-208ENST00000471322 SLCO3A1Q9UIG8 710 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 FKBPLQ9UIM3 349 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 CRYL1Q9Y2S2 319 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 COMMD10Q9Y6G5 202 aa17.37■□□□□ 0.37
HSPG2-208ENST00000471322 TMEM114B3SHH9 223 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 APBB3O95704 486 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 SLC4A1P02730 911 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 FDXRP22570 491 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 SLC1A6P48664 564 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 SUOXP51687 545 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 CACNG1Q06432 222 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 ACAP2Q15057 778 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 ZNF528Q3MIS6 628 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 HSF5Q4G112 596 aaPredicted RBP17.36■□□□□ 0.37
HSPG2-208ENST00000471322 CERS6Q6ZMG9 384 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 USP45Q70EL2 814 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 LYSMD3Q7Z3D4 306 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 PGBD3Q8N328 593 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 FSTL5Q8N475 847 aaPredicted RBP17.36■□□□□ 0.37
HSPG2-208ENST00000471322 OR6Y1Q8NGX8 325 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 LPGAT1Q92604 370 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 NXNL1Q96CM4 212 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 UBXN10Q96LJ8 280 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 SMIM14Q96QK8 99 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 GABRG3Q99928 467 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 AARSD1Q9BTE6 412 aaKnown RBP17.36■□□□□ 0.37
HSPG2-208ENST00000471322 OXSMQ9NWU1 459 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 ZSCAN32Q9NX65 697 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 APPL1Q9UKG1 709 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 SLC30A1Q9Y6M5 507 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 GPR179Q6PRD1 2367 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 MYLKQ15746 1914 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 ALPIP09923 528 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 NFKBIAP25963 317 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 GKP32189 559 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 HNF1BP35680 557 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 ARFIP2P53365 341 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 ADARP55265 1226 aaKnown RBP17.36■□□□□ 0.37
HSPG2-208ENST00000471322 CORO7P57737 925 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 OVGP1Q12889 678 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 SEMA3AQ14563 771 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms