RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 GALK1P51570 392 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 ATP6V0D1P61421 351 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 PFKPQ01813 784 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 SEMG2Q02383 582 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 ASPHQ12797 758 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 STX3Q13277 289 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 AAK1Q2M2I8 961 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 SETMARQ53H47 684 aaPredicted RBP9.31□□□□□ -0.92
VPS52-216ENST00000471309 FAM46CQ5VWP2 391 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 LIPMQ5VYY2 423 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 CES4AQ5XG92 561 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 UGT3A1Q6NUS8 523 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 FBXL19Q6PCT2 694 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 FOXR1Q6PIV2 292 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 HSD11B1LQ7Z5J1 315 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 TTC7BQ86TV6 843 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 RALGPS2Q86X27 583 aaPredicted RBP9.31□□□□□ -0.92
VPS52-216ENST00000471309 C10orf107Q8IVU9 208 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 NKAPQ8N5F7 415 aaKnown RBP9.31□□□□□ -0.92
VPS52-216ENST00000471309 ZNF513Q8N8E2 541 aaPredicted RBP9.31□□□□□ -0.92
VPS52-216ENST00000471309 CD200R1Q8TD46 325 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 KCNV2Q8TDN2 545 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 ANKRD49Q8WVL7 239 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 CCDC126Q96EE4 140 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 ACOX2Q99424 681 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 ZSCAN5AQ9BUG6 496 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 HDAC8Q9BY41 377 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 DERL2Q9GZP9 239 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 CLPBQ9H078 707 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 UBE2ZQ9H832 354 aaPredicted RBP9.31□□□□□ -0.92
VPS52-216ENST00000471309 PRSS16Q9NQE7 514 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 DYRK4Q9NR20 520 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 THAP1Q9NVV9 213 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 CACNA2D2Q9NY47 1150 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 ZDHHC3Q9NYG2 299 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 CPSF2Q9P2I0 782 aaKnown RBP9.31□□□□□ -0.92
VPS52-216ENST00000471309 TRMT6Q9UJA5 497 aaKnown RBP9.31□□□□□ -0.92
VPS52-216ENST00000471309 FAM50BQ9Y247 325 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 ARL2BPQ9Y2Y0 163 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 E5RI56 91 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 K7EQS6 105 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 SOX1O00570 391 aaPredicted RBP9.3□□□□□ -0.92
VPS52-216ENST00000471309 TRIM13O60858 407 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 UGT1A6P19224 532 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 TFEBP19484 476 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 UGT1A1P22309 533 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 UGT1A4P22310 534 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 KCNA5P22460 613 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 ATP5F1P24539 256 aaPredicted RBP9.3□□□□□ -0.92
VPS52-216ENST00000471309 CA5AP35218 305 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 UGT1A3P35503 534 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 UGT1A5P35504 534 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 NSG1P42857 185 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 KIR2DL1P43626 348 aaPredicted RBP9.3□□□□□ -0.92
VPS52-216ENST00000471309 PSMD8P48556 350 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 CLCN7P51798 805 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 DNAJB13P59910 316 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 NFKB2Q00653 900 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 CAMK2GQ13555 558 aaPredicted RBP9.3□□□□□ -0.92
VPS52-216ENST00000471309 POM121L1PQ3SYA9 428 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 ATP13A5Q4VNC0 1218 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 HENMT1Q5T8I9 393 aaKnown RBP9.3□□□□□ -0.92
VPS52-216ENST00000471309 C6orf89Q6UWU4 347 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 LIPIQ6XZB0 460 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 MACC1Q6ZN28 852 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 ZCCHC23Q6ZST2 131 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 RFLNAQ6ZTI6 216 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 ERN2Q76MJ5 926 aaKnown RBP9.3□□□□□ -0.92
VPS52-216ENST00000471309 ZNF765Q7L2R6 523 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 CYP2U1Q7Z449 544 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 TECPR1Q7Z6L1 1165 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 CRLF3Q8IUI8 442 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 CHPFQ8IZ52 775 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 NRSN1Q8IZ57 195 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 SPATA6LQ8N4H0 392 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 TRAM1L1Q8N609 369 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 GIMAP7Q8NHV1 300 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 RHEBL1Q8TAI7 183 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 EZH1Q92800 747 aaPredicted RBP9.3□□□□□ -0.92
VPS52-216ENST00000471309 RAB7BQ96AH8 199 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 COQ10AQ96MF6 247 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 VPS35Q96QK1 796 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 COPS8Q99627 209 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 GPR21Q99679 349 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 GABRG3Q99928 467 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 SIKE1Q9BRV8 207 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 BOCQ9BWV1 1114 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 TRIM55Q9BYV6 548 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 RSPH9Q9H1X1 276 aaPredicted RBP9.3□□□□□ -0.92
VPS52-216ENST00000471309 FAM83DQ9H4H8 585 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 TFB2MQ9H5Q4 396 aaKnown RBP9.3□□□□□ -0.92
VPS52-216ENST00000471309 C8orf33Q9H7E9 229 aaPredicted RBP9.3□□□□□ -0.92
VPS52-216ENST00000471309 FBRSL1Q9HCM7 1045 aaKnown RBP9.3□□□□□ -0.92
VPS52-216ENST00000471309 ITM2BQ9Y287 266 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 MTF2Q9Y483 593 aaPredicted RBP9.3□□□□□ -0.92
VPS52-216ENST00000471309 CUL9Q8IWT3 2517 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 A0A0C4DFX4 3053 aa9.3□□□□□ -0.92
VPS52-216ENST00000471309 CDH23Q9H251 3354 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 A8MT66 165 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 F8W8V4 182 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms