RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 TCP10LQ8TDR4 215 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 TCEAL3Q969E4 200 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 RAB7BQ96AH8 199 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 ULK4Q96C45 1275 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 DNAJC1Q96KC8 554 aaKnown RBP9.11□□□□□ -0.95
PTPRE-207ENST00000471218 AGAP2Q99490 1192 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 SCNM1Q9BWG6 230 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 GPR63Q9BZJ6 419 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 TMEM245Q9H330 911 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 SMOC1Q9H4F8 434 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 ZFYVE1Q9HBF4 777 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 SNX15Q9NRS6 342 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 SMOXQ9NWM0 555 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 SIRPGQ9P1W8 387 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 THAP10Q9P2Z0 257 aaPredicted RBP9.11□□□□□ -0.95
PTPRE-207ENST00000471218 SLC2A6Q9UGQ3 507 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 SLC6A14Q9UN76 642 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 PCDHB1Q9Y5F3 818 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 SPO11Q9Y5K1 396 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 ARL5AQ9Y689 179 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 FRYQ5TBA9 3013 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 BAHCC1Q9P281 2608 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ABCA7Q8IZY2 2146 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 TRBV5-4A0A0C4DH59 114 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 FAM95CA0A1B0GW59 222 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 CCDC162PA2VCL2 907 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 UGT1A9O60656 530 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 KAT7O95251 611 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 GOT2P00505 430 aaKnown RBP9.1□□□□□ -0.95
PTPRE-207ENST00000471218 GNSP15586 552 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ITGALP20701 1170 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 RPS3P23396 243 aaKnown RBP eCLIP9.1□□□□□ -0.95
PTPRE-207ENST00000471218 GRK2P25098 689 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ITGB7P26010 798 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 GABRB3P28472 473 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 FOXN2P32314 431 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 SERPINB5P36952 375 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 OPRD1P41143 372 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 SKIV2L2P42285 1042 aaKnown RBP9.1□□□□□ -0.95
PTPRE-207ENST00000471218 CTSOP43234 321 aaPredicted RBP9.1□□□□□ -0.95
PTPRE-207ENST00000471218 SERPINB4P48594 390 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 STK19P49842 368 aaPredicted RBP9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ARSDP51689 593 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 WDR4P57081 412 aaKnown RBP9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ELP6Q0PNE2 266 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 PDE1CQ14123 709 aaPredicted RBP9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ITIH4Q14624 930 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 USP10Q14694 798 aaKnown RBP9.1□□□□□ -0.95
PTPRE-207ENST00000471218 CDKN3Q16667 212 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 FAM83EQ2M2I3 478 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ACCSLQ4AC99 568 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 FAM46CQ5VWP2 391 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ATG16L1Q676U5 607 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 KLC3Q6P597 504 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 LVRNQ6Q4G3 990 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 Q6ZVU0 165 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ZNF765Q7L2R6 523 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 KDELC2Q7Z4H8 507 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 SNX20Q7Z614 316 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 NLRP8Q86W28 1048 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 NRSN1Q8IZ57 195 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 PGBD3Q8N328 593 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 MDGA1Q8NFP4 955 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 MDM1Q8TC05 714 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ZNF398Q8TD17 642 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 LRRC8CQ8TDW0 803 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 HEXDCQ8WVB3 486 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ZCCHC14Q8WYQ9 949 aaKnown RBP9.1□□□□□ -0.95
PTPRE-207ENST00000471218 OR8D1Q8WZ84 308 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 KCNJ9Q92806 393 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 GATA6Q92908 595 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 VOPP1Q96AW1 172 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 MRRFQ96E11 262 aaKnown RBP9.1□□□□□ -0.95
PTPRE-207ENST00000471218 CCDC126Q96EE4 140 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 RPL10LQ96L21 214 aaKnown RBP9.1□□□□□ -0.95
PTPRE-207ENST00000471218 TBATAQ96M53 351 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 NSMCE3Q96MG7 304 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 SIKE1Q9BRV8 207 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 TPSD1Q9BZJ3 242 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ZDHHC5Q9C0B5 715 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 CIPCQ9C0C6 399 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 CCDC68Q9H2F9 335 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 UGT1A7Q9HAW7 530 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 UGT1A10Q9HAW8 530 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 UGT1A8Q9HAW9 530 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 SUSD2Q9UGT4 822 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 IL36AQ9UHA7 158 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 SLCO3A1Q9UIG8 710 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 WASF3Q9UPY6 502 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ACOT9Q9Y305 439 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 ACTL7AQ9Y615 435 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 SLC30A1Q9Y6M5 507 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 WASF2Q9Y6W5 498 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 GON4LQ3T8J9 2241 aa9.1□□□□□ -0.95
PTPRE-207ENST00000471218 A0A096LPK6 155 aa9.09□□□□□ -0.95
PTPRE-207ENST00000471218 C1orf232A0A0U1RR37 186 aa9.09□□□□□ -0.95
PTPRE-207ENST00000471218 FAM221BA6H8Z2 402 aa9.09□□□□□ -0.95
PTPRE-207ENST00000471218 TBC1D3BA6NDS4 549 aa9.09□□□□□ -0.95
PTPRE-207ENST00000471218 C1QTNF3-AMACRE9PGA6 284 aa9.09□□□□□ -0.95
PTPRE-207ENST00000471218 EIF3FO00303 357 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms