RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 CNSTQ6PJW8 725 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 TBC1D1Q86TI0 1168 aaPredicted RBP9.69□□□□□ -0.86
CCM2-204ENST00000470837 EXOC3L1Q86VI1 746 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 HORMAD1Q86X24 394 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 PIANPQ8IYJ0 282 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 CYP4X1Q8N118 509 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 C4orf33Q8N1A6 199 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 ZNF687Q8N1G0 1237 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 CAMKK1Q8N5S9 505 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 OR2T34Q8NGX1 318 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 SCAMP4Q969E2 229 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 CLDN23Q96B33 292 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 TLCD1Q96CP7 247 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 SPACA7Q96KW9 195 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 UHRF1Q96T88 793 aaPredicted RBP9.69□□□□□ -0.86
CCM2-204ENST00000470837 ABCG8Q9H221 673 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 VPS11Q9H270 941 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 ITM2CQ9NQX7 267 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 SNX15Q9NRS6 342 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 PCMTD2Q9NV79 361 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 SMOXQ9NWM0 555 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 TAS2R13Q9NYV9 303 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 SERGEFQ9UGK8 458 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 MTO1Q9Y2Z2 717 aaKnown RBP9.69□□□□□ -0.86
CCM2-204ENST00000470837 MUC22E2RYF6 1773 aaPredicted RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 A0A087X1B8 175 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 A0A096LPK6 155 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 TRBV5-4A0A0C4DH59 114 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 A0A1W2PPM1 405 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 GOLGA8RI6L899 631 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 POLR3GO15318 223 aaPredicted RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 SPINT1O43278 529 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 SEMA4FO95754 770 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 PCCBP05166 539 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 DCNP07585 359 aaKnown RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 PKMP14618 531 aaKnown RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 SKIV2L2P42285 1042 aaKnown RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 ABCG1P45844 678 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 CDKN1CP49918 316 aaPredicted RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 ADARP55265 1226 aaKnown RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 TAS2R38P59533 333 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 RAB10P61026 200 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 CREB5Q02930 508 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 DPTQ07507 201 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 SEMA3AQ14563 771 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 GPRC6AQ5T6X5 926 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 HECTD2Q5U5R9 776 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 SEL1L3Q68CR1 1132 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 KLC3Q6P597 504 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 RFLNAQ6ZTI6 216 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 TAX1BP1Q86VP1 789 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 LCA5Q86VQ0 697 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 NLRP8Q86W28 1048 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 SLC41A1Q8IVJ1 513 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.68□□□□□ -0.86
CCM2-204ENST00000470837 CCDC63Q8NA47 563 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 BTN2A2Q8WVV5 523 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 DYDC1Q8WWB3 177 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 LPGAT1Q92604 370 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 EDAQ92838 391 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 GLYATL1Q969I3 302 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 VPS35Q96QK1 796 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 PANX3Q96QZ0 392 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 NDNQ99608 321 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 KLF6Q99612 283 aaPredicted RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 AARSD1Q9BTE6 412 aaKnown RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 SLC17A9Q9BYT1 436 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 SLC13A1Q9BZW2 595 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 SYTL2Q9HCH5 934 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 GPAMQ9HCL2 828 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 CD248Q9HCU0 757 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 SSU72Q9NP77 194 aaKnown RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 SPATA6Q9NWH7 488 aaPredicted RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 EURLQ9NYK6 297 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 USP36Q9P275 1121 aaKnown RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 DCDC2Q9UHG0 476 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 TRMT6Q9UJA5 497 aaKnown RBP9.68□□□□□ -0.86
CCM2-204ENST00000470837 CYP8B1Q9UNU6 501 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 ANKRD6Q9Y2G4 727 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 ACOT9Q9Y305 439 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 COL4A2P08572 1712 aa9.68□□□□□ -0.86
CCM2-204ENST00000470837 MIA3Q5JRA6 1907 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 GAPDHSO14556 408 aaPredicted RBP9.67□□□□□ -0.86
CCM2-204ENST00000470837 INPP4BO15327 924 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 SLC31A1O15431 190 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 GPR39O43194 453 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 OR1I1O60431 355 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 MAGEC1O60732 1142 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 GLRA3O75311 464 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 SPAG7O75391 227 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 AP2A2O94973 939 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 ZWINTO95229 277 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 ASMTLO95671 621 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 PAK4O96013 591 aaPredicted RBP9.67□□□□□ -0.86
CCM2-204ENST00000470837 FTH1P02794 183 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 ALDOAP04075 364 aaKnown RBP9.67□□□□□ -0.86
CCM2-204ENST00000470837 GSTA1P08263 222 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 F7P08709 466 aaPredicted RBP9.67□□□□□ -0.86
CCM2-204ENST00000470837 PRSS56P0CW18 603 aa9.67□□□□□ -0.86
CCM2-204ENST00000470837 NEFHP12036 1026 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms