RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 MLPHQ9BV36 600 aaPredicted RBP9.49□□□□□ -0.89
NHLRC3-203ENST00000470258 TMEM39BQ9GZU3 492 aa9.49□□□□□ -0.89
NHLRC3-203ENST00000470258 TMEM134Q9H6X4 195 aa9.49□□□□□ -0.89
NHLRC3-203ENST00000470258 MID1IP1Q9NPA3 183 aa9.49□□□□□ -0.89
NHLRC3-203ENST00000470258 SETD4Q9NVD3 440 aa9.49□□□□□ -0.89
NHLRC3-203ENST00000470258 INTS7Q9NVH2 962 aaKnown RBP9.49□□□□□ -0.89
NHLRC3-203ENST00000470258 PAQR5Q9NXK6 330 aaPredicted RBP9.49□□□□□ -0.89
NHLRC3-203ENST00000470258 SLC2A6Q9UGQ3 507 aa9.49□□□□□ -0.89
NHLRC3-203ENST00000470258 TCRBV5S2A0A599 114 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 MAGEB16A2A368 324 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 EEF2KO00418 725 aaKnown RBP9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 SSX4O60224 188 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 APOA1P02647 267 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 SLC4A1P02730 911 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 FTH1P02794 183 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 ABCB1P08183 1280 aaPredicted RBP9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 SLC1A2P43004 574 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 TRAF3Q13114 568 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 SYT16Q17RD7 645 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 BTBD8Q5XKL5 378 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 AMBRA1Q9C0C7 1298 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 NTN4Q9HB63 628 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 CASS4Q9NQ75 786 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 DOCK5Q9H7D0 1870 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 LRRC14BA6NHZ5 514 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 CCDC154A6NI56 674 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 HCRTO43612 131 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 SIX3O95343 332 aaPredicted RBP9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 ANGPTL1O95841 491 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 CD4P01730 458 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 CPB1P15086 417 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 HOXA10P31260 410 aaPredicted RBP9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 ATICP31939 592 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 GLUD2P49448 558 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 ST13P50502 369 aaKnown RBP9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 OR2B6P58173 313 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 SP2Q02086 613 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 LAMTOR4Q0VGL1 99 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 EPS8Q12929 822 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 PAGE3Q5JUK9 113 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 MPZL3Q6UWV2 235 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 CYHR1Q6ZMK1 362 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 BPHLQ86WA6 291 aaPredicted RBP9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 BEND7Q8N7W2 519 aaPredicted RBP9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 SPATA22Q8NHS9 363 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 DYNC2LI1Q8TCX1 351 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 STON2Q8WXE9 905 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 LGALS12Q96DT0 336 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 PPM1MQ96MI6 270 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 RHNO1Q9BSD3 238 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 WDR6Q9NNW5 1121 aaKnown RBP9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 TRMT13Q9NUP7 481 aaKnown RBP9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 TEX28O15482 410 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 CST1P01037 141 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 MYCLP1P12525 358 aaPredicted RBP9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 EFNA5P52803 228 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 FOXA1P55317 472 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 MTPNP58546 118 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 CDC20Q12834 499 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 GRM1Q13255 1194 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 SIM2Q14190 667 aaPredicted RBP9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 NPTX1Q15818 432 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 AGAP9Q5VTM2 703 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 LYPD8Q6UX82 237 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 OTOP3Q7RTS5 596 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 OR6B3Q8NGW1 331 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 FRS2Q8WU20 508 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 DCSTAMPQ9H295 470 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 RNF19AQ9NV58 838 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 NSMCE4AQ9NXX6 385 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 PCDHA9Q9Y5H5 950 aa9.48□□□□□ -0.89
NHLRC3-203ENST00000470258 TANC1Q9C0D5 1861 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 EFCAB9A8MZ26 197 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 B4GALT4O60513 344 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 ALX3O95076 343 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 PGLSO95336 258 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 CDH17Q12864 832 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 FAM98BQ52LJ0 330 aaKnown RBP9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 STRIP1Q5VSL9 837 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 ARHGAP36Q6ZRI8 547 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 DCP1BQ8IZD4 617 aaKnown RBP9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 DEFB106AQ8N104 65 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 NSUN6Q8TEA1 469 aaKnown RBP9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 TWIST2Q8WVJ9 160 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 TP53INP1Q96A56 240 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 CELF6Q96J87 481 aaKnown RBP9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 BTN2A3PQ96KV6 586 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 DEFB129Q9H1M3 183 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 ZBTB20Q9HC78 741 aaPredicted RBP9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 RPRD1BQ9NQG5 326 aaKnown RBP9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 NECTIN3Q9NQS3 549 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 ENTPD7Q9NQZ7 604 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 RABL2BQ9UNT1 228 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 DNAJC15Q9Y5T4 150 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 NUP205Q92621 2012 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 LOC100506127A0A0U1RQW1 187 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 AP3D1O14617 1153 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 TFECO14948 347 aaPredicted RBP9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 UMPSP11172 480 aa9.47□□□□□ -0.89
NHLRC3-203ENST00000470258 CD36P16671 472 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms