RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 STK32CQ86UX6 486 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 FAM160B2Q86V87 743 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 ANKRD53Q8N9V6 530 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 HTR3CQ8WXA8 447 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 BIRC7Q96CA5 298 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 TM9SF2Q99805 663 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 TRMOQ9BU70 441 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 C6orf62Q9GZU0 229 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 RHOJQ9H4E5 214 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 SCN3BQ9NY72 215 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 XPR1Q9UBH6 696 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 TRMT6Q9UJA5 497 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 USP22Q9UPT9 525 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 RUVBL2Q9Y230 463 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 AP3M1Q9Y2T2 418 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 PCDHGA10Q9Y5H3 936 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 AUP1Q9Y679 476 aa8.98□□□□□ -0.97
SMARCE1-207ENST00000469334 DICER1Q9UPY3 1922 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 C2CD4BA6NLJ0 364 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 DHX15O43143 795 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 NDUFA2O43678 99 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 ANGPTL1O95841 491 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 PSAPP07602 524 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 ITGAMP11215 1152 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 MTHFD1P11586 935 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 AGXTP21549 392 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 CYP2F1P24903 491 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 CYP2C18P33260 490 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 TGFBR2P37173 567 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 SLC26A3P40879 764 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 WNT7BP56706 349 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 C1QTNF8P60827 252 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 SNAP25P60880 206 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 TFAMQ00059 246 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 PIGFQ07326 219 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 KCNAB2Q13303 367 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 IKZF1Q13422 519 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 LRRC26Q2I0M4 334 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 FAM98BQ52LJ0 330 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 VARS2Q5ST30 1063 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 PXDC1Q5TGL8 231 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 FAM171BQ6P995 826 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 DPY19L3Q6ZPD9 716 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 DCP1BQ8IZD4 617 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 NLGN4XQ8N0W4 816 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 MIER2Q8N344 545 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 COLGALT1Q8NBJ5 622 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 MCPH1Q8NEM0 835 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 FLCNQ8NFG4 579 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 OR10T2Q8NGX3 314 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 BSNDQ8WZ55 320 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 SLC38A4Q969I6 547 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 SH3KBP1Q96B97 665 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 ATXN7L3BQ96GX2 97 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 CPB2Q96IY4 423 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 RNF145Q96MT1 663 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 UGT2B28Q9BY64 529 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 POMKQ9H5K3 350 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 FAM49BQ9NUQ9 324 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 POLR3BQ9NW08 1133 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 CYTH4Q9UIA0 394 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 SLC39A10Q9ULF5 831 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 TLR6Q9Y2C9 796 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 ACOT9Q9Y305 439 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 MRPL11Q9Y3B7 192 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 LYVE1Q9Y5Y7 322 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 LY75O60449 1722 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 ZNF541Q9H0D2 1346 aa8.97□□□□□ -0.97
SMARCE1-207ENST00000469334 LOC100130705A0A1B0GUX0 176 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 FAM92AA1XBS5 289 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 MEIOCA2RUB1 952 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 LINC00862A6NCI5 91 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 PTGES3LE9PB15 166 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 G3V2T6 193 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 LRIG2O94898 1065 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 SLC35E2BP0CK96 405 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 ACADMP11310 421 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 CD36P16671 472 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 HOXB6P17509 224 aaKnown RBP8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 SFNP31947 248 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 MRPL19P49406 292 aaKnown RBP8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 FCGRTP55899 365 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 SLC35A2P78381 396 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 POU6F2P78424 691 aaPredicted RBP8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 LIPEQ05469 1076 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 POU5F1BQ06416 359 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 FAPQ12884 760 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 CDK5R2Q13319 367 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 UGP2Q16851 508 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 MFSD14BQ5SR56 506 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 TSTD2Q5T7W7 516 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 FAM102AQ5T9C2 384 aaPredicted RBP8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 NXNL2Q5VZ03 156 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 SDE2Q6IQ49 451 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 CES5AQ6NT32 575 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 RBM23Q86U06 439 aaKnown RBP8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 CUZD1Q86UP6 607 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 KCNMB4Q86W47 210 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms