RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 MMGT1Q8N4V1 131 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 ATPAF2Q8N5M1 289 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 NPWQ8N729 165 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 RTL3Q8N8U3 475 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 CCDC89Q8N998 374 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 HJURPQ8NCD3 748 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 C1orf162Q8NEQ5 155 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 PPP1R14CQ8TAE6 165 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 GRK7Q8WTQ7 553 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 NSMCE1Q8WV22 266 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 OSCP1Q8WVF1 389 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 TFB1MQ8WVM0 346 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 GAB3Q8WWW8 586 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 FGF14Q92915 247 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 FAF2Q96CS3 445 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 HMCESQ96FZ2 354 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 PRICKLE1Q96MT3 831 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 NECTIN4Q96NY8 510 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 SMAD5Q99717 465 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 SOX7Q9BT81 388 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 KLC2Q9H0B6 622 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 LRRC19Q9H756 370 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 KIF9Q9HAQ2 790 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 EPB41L5Q9HCM4 733 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 PARD6AQ9NPB6 346 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 SPHK2Q9NRA0 654 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 TMEM248Q9NWD8 314 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 DNAJC28Q9NX36 388 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 TBC1D14Q9P2M4 693 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 ASIC3Q9UHC3 531 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 FEZ2Q9UHY8 353 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 IPO11Q9UI26 975 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 MAGEL2Q9UJ55 1249 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 VPS28Q9UK41 221 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 HPCAL4Q9UM19 191 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 EDARQ9UNE0 448 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 DRG1Q9Y295 367 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 SPEF1Q9Y4P9 236 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 TTLL3Q9Y4R7 772 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 ACTL7AQ9Y615 435 aa4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 PRRC2BQ5JSZ5 2229 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-204ENST00000468545 IGLV3-10A0A075B6K4 115 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 UQCRHLA0A096LP55 91 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 A0A1B0GVM2 712 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 BCLAF3A2AJT9 711 aaKnown RBP4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 EFCAB8A8MWE9 144 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 HACD1B0YJ81 288 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 ZNF487B1APH4 448 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 C2CD4DB7Z1M9 353 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 SNAP91O60641 907 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 FSBPO95073 299 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 LUC7L3O95232 432 aaKnown RBP4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 NFATC1O95644 943 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 GAS8O95995 478 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 MT-CO1P00395 513 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 UQCRHP07919 91 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 MYBL2P10244 700 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 TYRP14679 529 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 IL9P15248 144 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 PSMC3P17980 439 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 FCARP24071 287 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 CCNCP24863 283 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 HOXD9P28356 352 aaPredicted RBP4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 HOXC13P31276 330 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 STIP1P31948 543 aaKnown RBP4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 CD70P32970 193 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 HTR7P34969 479 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 RPL22P35268 128 aaKnown RBP4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 ACTN2P35609 894 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 GARSP41250 739 aaKnown RBP4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 MTNR1BP49286 362 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 FNTAP49354 379 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 NDST2P52849 883 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 SRSF2Q01130 221 aaKnown RBP4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 GNA12Q03113 381 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 GAD2Q05329 585 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 KDSRQ06136 332 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 GALNT2Q10471 571 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 LMAN2Q12907 356 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 GPS1Q13098 491 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 XRCC4Q13426 336 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 RUNX3Q13761 415 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 HLTFQ14527 1009 aaKnown RBP eCLIP4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 PDGFRLQ15198 375 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 ELF2Q15723 593 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 CYP1B1Q16678 543 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 AAK1Q2M2I8 961 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 MUM1Q2TAK8 710 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 C5orf22Q49AR2 442 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 ACCSLQ4AC99 568 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 SLC45A4Q5BKX6 768 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 TOR2AQ5JU69 321 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 ANKRD20A2Q5SQ80 823 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 FAXCQ5TGI0 409 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 ANKRD20A1Q5TYW2 823 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 MANEALQ5VSG8 457 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 ANKRD20A3Q5VUR7 823 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 LINGO4Q6UY18 593 aa4.13□□□□□ -1.75
TMEM39A-204ENST00000468545 ARHGEF18Q6ZSZ5 1173 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms