RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TNPO2O14787 897 aaKnown RBP17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 SYNCRIPO60506 623 aaKnown RBP17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 IL10P22301 178 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 MPSTP25325 297 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 FASP25445 335 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 CHRNA4P43681 627 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 NAB1Q13506 487 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 MAPRE2Q15555 327 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 TMEM198Q66K66 360 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 TAF2Q6P1X5 1199 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 LINC00523Q86TU6 105 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 TMEM86AQ8N2M4 240 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 EMILIN2Q9BXX0 1053 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 SMPD3Q9NY59 655 aaPredicted RBP17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 CD300AQ9UGN4 299 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 MOSPD1Q9UJG1 213 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 SARDHQ9UL12 918 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 TRPV2Q9Y5S1 764 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 COPG1Q9Y678 874 aaKnown RBP17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 TTC24A2A3L6 582 aaPredicted RBP17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 EVPLLA8MZ36 301 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 UGT2B11O75310 529 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 AHSGP02765 367 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 ARL1P40616 181 aaPredicted RBP17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 ZNF157P51786 506 aaPredicted RBP17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 GJA9P57773 515 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 RALGDSQ12967 914 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 AQP6Q13520 282 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 MAPK11Q15759 364 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 UBE2UQ5VVX9 321 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 RSBN1Q5VWQ0 802 aaPredicted RBP17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 XAF1Q6GPH4 301 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 ESRP1Q6NXG1 681 aaKnown RBP17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 SPRED1Q7Z699 444 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 SCML4Q8N228 414 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 PIK3C3Q8NEB9 887 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 CHAC2Q8WUX2 184 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 CENPNQ96H22 339 aaPredicted RBP17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 BTN2A3PQ96KV6 586 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 MARK4Q96L34 752 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 GATA5Q9BWX5 397 aaPredicted RBP17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 POLE4Q9NR33 117 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 KCNU1A8MYU2 1149 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 GSTM2P28161 218 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 USP10Q14694 798 aaKnown RBP17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 SUZ12Q15022 739 aaKnown RBP17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 CARTPTQ16568 116 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 CEP78Q5JTW2 689 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 CCSAPQ6IQ19 270 aaPredicted RBP17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 SLC41A1Q8IVJ1 513 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 SLC38A6Q8IZM9 456 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 KCTD4Q8WVF5 259 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 TRIM63Q969Q1 353 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 CENPOQ9BU64 300 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 FUNDC2Q9BWH2 189 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 TRIM15Q9C019 465 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 ARHGAP39Q9C0H5 1083 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 RETREG1Q9H6L5 497 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 AGPAT4Q9NRZ5 378 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 MRGBPQ9NV56 204 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 EIF3LQ9Y262 564 aaKnown RBP17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 NCAM2O15394 837 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 PAGE1O75459 146 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 M6PRP20645 277 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 PCSK1P29120 753 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 HOXC8P31273 242 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 CASP3P42574 277 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 VAC14Q08AM6 782 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 INPP5AQ14642 412 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 PCSK7Q16549 785 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 PAGE2BQ5JRK9 111 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 GPR152Q8TDT2 470 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 PGAP3Q96FM1 320 aaPredicted RBP17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 SLC45A3Q96JT2 553 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 SNX18Q96RF0 628 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 DHRS9Q9BPW9 319 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 SLC39A8Q9C0K1 460 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 GPSM3Q9Y4H4 160 aa17.95■□□□□ 0.46
SNAPC3-205ENST00000467062 CCRL2O00421 344 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 GRID2O43424 1007 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 F9P00740 461 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 BMP4P12644 408 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 TFEBP19484 476 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 HCAR3P49019 387 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 CDH17Q12864 832 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 PRKAA1Q13131 559 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 DGUOKQ16854 277 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 CYBRD1Q53TN4 286 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 PM20D1Q6GTS8 502 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 CD300LGQ6UXG3 332 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 PRR23CQ6ZRP0 262 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 USP51Q70EK9 711 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 FKBP10Q96AY3 582 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 SCYL1Q96KG9 808 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 IL12RB2Q99665 862 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 FICDQ9BVA6 458 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 IL22Q9GZX6 179 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 FKBP14Q9NWM8 211 aa17.94■□□□□ 0.46
SNAPC3-205ENST00000467062 AURKCQ9UQB9 309 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms