RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 B4E171 279 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 APOL1O14791 398 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 GRID2O43424 1007 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 NUAK1O60285 661 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 SLC2A4P14672 509 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 UGT1A3P35503 534 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 TSPAN7P41732 249 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 TRIM14Q14142 442 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 ZNF569Q5MCW4 686 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 DCAF12Q5T6F0 453 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 ALS2CLQ60I27 953 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 IYDQ6PHW0 289 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 PRICKLE2Q7Z3G6 844 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 KDELC2Q7Z4H8 507 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 SLC9B2Q86UD5 537 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 IL22RA1Q8N6P7 574 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 HTR3CQ8WXA8 447 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 SH3KBP1Q96B97 665 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 EID2BQ96D98 161 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 AGAP3Q96P47 875 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 TRIB3Q96RU7 358 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 MAK16Q9BXY0 300 aaKnown RBP18.95■□□□□ 0.62
COL9A3-206ENST00000466532 ASPSCR1Q9BZE9 553 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 FAM117AQ9C073 453 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 CARD9Q9H257 536 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 ARFGAP3Q9NP61 516 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 ZNHIT6Q9NWK9 470 aaKnown RBP18.95■□□□□ 0.62
COL9A3-206ENST00000466532 PDP2Q9P2J9 529 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 ATXN10Q9UBB4 475 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 A6NCN8 305 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 C3orf70A6NLC5 250 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-206ENST00000466532 PYCARD-AS1I3L0S3 204 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 PPP1R12AO14974 1030 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-206ENST00000466532 SLC4A1P02730 911 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 FAM87AP0C7U9 286 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 PIRTP0C851 137 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 F3P13726 295 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 ZNF8P17098 575 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-206ENST00000466532 ARHGAP25P42331 645 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 MAPK9P45984 424 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 RAB15P59190 212 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 PDK1Q15118 436 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 PCSK7Q16549 785 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 TBR1Q16650 682 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 ZNF648Q5T619 568 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-206ENST00000466532 ANKS6Q68DC2 871 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 WDR74Q6RFH5 385 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-206ENST00000466532 NPNTQ6UXI9 565 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 NT5DC3Q86UY8 548 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 VSIG1Q86XK7 387 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 PHYKPLQ8IUZ5 450 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 BMPERQ8N8U9 685 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 GPR26Q8NDV2 337 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 NCSTNQ92542 709 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 IMP4Q96G21 291 aaKnown RBP18.94■□□□□ 0.62
COL9A3-206ENST00000466532 OR2AG1Q9H205 316 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 SHOC2Q9UQ13 582 aa18.94■□□□□ 0.62
COL9A3-206ENST00000466532 HEMK1Q9Y5R4 338 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-206ENST00000466532 ASH1LQ9NR48 2969 aaKnown RBP18.94■□□□□ 0.62
COL9A3-206ENST00000466532 KIR2DS5A0A0G2JLQ3 304 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 A0A0G2JNG1 304 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 KIR2DS3K7RE56 304 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 CBFA2T2O43439 604 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 SLC25A14O95258 325 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-206ENST00000466532 KRT1P04264 644 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 EPHA4P54764 986 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 KIR2DS5Q14953 304 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 ODF2Q5BJF6 829 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 ARHGAP22Q7Z5H3 698 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 RFX6Q8HWS3 928 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 CACNA2D3Q8IZS8 1091 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 OLFM3Q96PB7 478 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 CHP1Q99653 195 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 ZSCAN5AQ9BUG6 496 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-206ENST00000466532 BRD8Q9H0E9 1235 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 SLC25A51Q9H1U9 297 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 MAGEE1Q9HCI5 957 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 RAD18Q9NS91 495 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 SPTLC3Q9NUV7 552 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 CPNE7Q9UBL6 633 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 ZNF711Q9Y462 761 aa18.93■□□□□ 0.62
COL9A3-206ENST00000466532 MYO18BQ8IUG5 2567 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 OR5K4A6NMS3 321 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 RAD1O60671 282 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 TPM1P09493 284 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 SFTPCP11686 197 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 LIFP15018 202 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 ZFXP17010 805 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-206ENST00000466532 DCDC1P59894 354 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 DYNLT1P63172 113 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 CDK18Q07002 472 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 B4GALNT4Q76KP1 1039 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 TMC3Q7Z5M5 1100 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 RHOT2Q8IXI1 618 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 TRAM1L1Q8N609 369 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 AVL9Q8NBF6 648 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 RNF25Q96BH1 459 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-206ENST00000466532 CCDC42Q96M95 316 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 TEFMQ96QE5 360 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms