RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SPAARA0A1B0GVQ0 90 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 HEATR9A2RTY3 570 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 GPR89AB7ZAQ6 455 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 AP3B1O00203 1094 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 YY2O15391 372 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 NUAK1O60285 661 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 SRP72O76094 671 aaKnown RBP20.12■□□□□ 0.81
SKA3-205ENST00000465471 TMEM63AO94886 807 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 GPR89BP0CG08 455 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 CTSEP14091 401 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 ADRA1DP25100 572 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 GNPDA1P46926 289 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 ACVR1Q04771 509 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 SEPT6Q14141 434 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 DEFB133Q30KQ1 61 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 ZCCHC8Q6NZY4 707 aaKnown RBP20.12■□□□□ 0.81
SKA3-205ENST00000465471 LRRC8BQ6P9F7 803 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 ADGRG6Q86SQ4 1221 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 NRROSQ86YC3 692 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 OR2M4Q96R27 311 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 BOCQ9BWV1 1114 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 ATXN10Q9UBB4 475 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 MOSPD1Q9UJG1 213 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 TCAF1Q9Y4C2 921 aa20.12■□□□□ 0.81
SKA3-205ENST00000465471 ZFC3H1O60293 1989 aaKnown RBP20.12■□□□□ 0.81
SKA3-205ENST00000465471 CHUKO15111 745 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 UGT1A9O60656 530 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 LDOC1O95751 146 aaPredicted RBP20.11■□□□□ 0.81
SKA3-205ENST00000465471 ANXA6P08133 673 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 UGT1A6P19224 532 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 UGT1A1P22309 533 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 UGT1A4P22310 534 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 UGT1A3P35503 534 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 UGT1A5P35504 534 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 ADCY8P40145 1251 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 NFATC2Q13469 925 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 LAMB3Q13751 1172 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 CCDC38Q502W7 563 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 C6orf132Q5T0Z8 1188 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 SYDE1Q6ZW31 735 aaPredicted RBP20.11■□□□□ 0.81
SKA3-205ENST00000465471 ZNF572Q7Z3I7 529 aaPredicted RBP20.11■□□□□ 0.81
SKA3-205ENST00000465471 GKN2Q86XP6 184 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 KLHL7Q8IXQ5 586 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 NAT8LQ8N9F0 302 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 MCUQ8NE86 351 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 OR13J1Q8NGT2 312 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 CCL4L1Q8NHW4 92 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 ZNF398Q8TD17 642 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 PEX13Q92968 403 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 UGT1A7Q9HAW7 530 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 UGT1A10Q9HAW8 530 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 UGT1A8Q9HAW9 530 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 ARFGAP3Q9NP61 516 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 SPEGQ15772 3267 aa20.11■□□□□ 0.81
SKA3-205ENST00000465471 GOLGA4Q13439 2230 aaKnown RBP20.1■□□□□ 0.81
SKA3-205ENST00000465471 TRBV5-4A0A0C4DH59 114 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 CCL22O00626 93 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 VEGFDO43915 354 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 ASMTLO95671 621 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 ZNF8P17098 575 aaPredicted RBP20.1■□□□□ 0.81
SKA3-205ENST00000465471 IVDP26440 423 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 NPY2RP49146 381 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 ARSDP51689 593 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 SIM1P81133 766 aaPredicted RBP20.1■□□□□ 0.81
SKA3-205ENST00000465471 TMPRSS15P98073 1019 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 PPP1R7Q15435 360 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 LDLRAP1Q5SW96 308 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 ZNF648Q5T619 568 aaPredicted RBP20.1■□□□□ 0.81
SKA3-205ENST00000465471 GPRC6AQ5T6X5 926 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 TSTD2Q5T7W7 516 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 MARK2Q7KZI7 788 aaKnown RBP20.1■□□□□ 0.81
SKA3-205ENST00000465471 NLRP9Q7RTR0 991 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 ERMP1Q7Z2K6 904 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 CAND1Q86VP6 1230 aaKnown RBP20.1■□□□□ 0.81
SKA3-205ENST00000465471 GALNT13Q8IUC8 556 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 SPATA4Q8NEY3 305 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 CDKN2AIPNLQ96HQ2 116 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 APOLD1Q96LR9 279 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 IL22Q9GZX6 179 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 OR2AG1Q9H205 316 aa20.1■□□□□ 0.81
SKA3-205ENST00000465471 ARHGEF17Q96PE2 2063 aaPredicted RBP20.09■□□□□ 0.81
SKA3-205ENST00000465471 MTX2O75431 263 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 TUBB4AP04350 444 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 FTH1P19P0C7X4 201 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 CKMT1AP12532 417 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 MLNP12872 115 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 CKMT2P17540 419 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 MC4RP32245 332 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 MAGEA3P43357 314 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 ACADVLP49748 655 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 SESN2P58004 480 aaPredicted RBP20.09■□□□□ 0.81
SKA3-205ENST00000465471 CTBSQ01459 385 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 DR1Q01658 176 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 ILF3Q12906 894 aaKnown RBP eCLIP20.09■□□□□ 0.811e-7■■■■□ 26.5
SKA3-205ENST00000465471 LRP8Q14114 963 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 DHX34Q14147 1143 aaKnown RBP20.09■□□□□ 0.81
SKA3-205ENST00000465471 TCEA2Q15560 299 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 SKIDA1Q1XH10 827 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 PCID2Q5JVF3 399 aa20.09■□□□□ 0.81
SKA3-205ENST00000465471 RNASEH2BQ5TBB1 312 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms