RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	PGK1	P00558	417 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CHRM4	P08173	479 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PRF1	P14222	555 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TNFAIP3	P21580	790 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PAX7	P23759	505 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PAFAH1B1	P43034	410 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TMED1	Q13445	227 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CAMK1	Q14012	370 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RBMS2	Q15434	407 aa	Known RBP	5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ETFDH	Q16134	617 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	LRCH2	Q5VUJ6	765 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	MORN5	Q5VZ52	161 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	NUGGC	Q68CJ6	796 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SNRNP48	Q6IEG0	339 aa	Known RBP	5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DEF8	Q6ZN54	512 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CCDC73	Q6ZRK6	1079 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	MOB3C	Q70IA8	216 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	G2E3	Q7L622	706 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TRIM74	Q86UV6	250 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TRIM73	Q86UV7	250 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FAM217A	Q8IXS0	508 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	MAML2	Q8IZL2	1156 aa	Predicted RBP	5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GPRC5A	Q8NFJ5	357 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	C16orf52	Q8NHV5	167 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SUSD6	Q92537	303 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	COQ8B	Q96D53	544 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	MPP4	Q96JB8	637 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	INTS2	Q9H0H0	1204 aa	Known RBP	5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ACTR5	Q9H9F9	607 aa	Predicted RBP	5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CHCHD3	Q9NX63	227 aa	Known RBP	5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZDHHC7	Q9NXF8	308 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	UTP6	Q9NYH9	597 aa	Known RBP	5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PEMT	Q9UBM1	199 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DBF4	Q9UBU7	674 aa	Predicted RBP	5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CNPY2	Q9Y2B0	182 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RAP2C	Q9Y3L5	183 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZHX2	Q9Y6X8	837 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SPAG17	Q6Q759	2223 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	MED13L	Q71F56	2210 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	UTP20	O75691	2785 aa	Known RBP	5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GRIN2D	O15399	1336 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	OTOG	Q6ZRI0	2925 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZMYM2	Q9UBW7	1377 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	BOD1L1	Q8NFC6	3051 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TEX22	C9J3V5	150 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SPTLC2	O15270	562 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SLC25A17	O43808	307 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TMCC1	O94876	653 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ADA	P00813	363 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ABCD3	P28288	659 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ELF1	P32519	619 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ABCD1	P33897	745 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DPP6	P42658	865 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CCT4	P50991	539 aa	Known RBP	5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CASP6	P55212	293 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FKBP1A	P62942	108 aa	Known RBP	5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	BAK1	Q16611	211 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	BEND3	Q5T5X7	828 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ACAD10	Q6JQN1	1059 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	OTUD6A	Q7L8S5	288 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	WDR5B	Q86VZ2	330 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CHD1L	Q86WJ1	897 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SLC25A41	Q8N5S1	370 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DPP10	Q8N608	796 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZNF366	Q8N895	744 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	LRRC57	Q8N9N7	239 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZBTB44	Q8NCP5	570 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZNF548	Q8NEK5	533 aa	Predicted RBP	5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RASSF8	Q8NHQ8	419 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DENND1A	Q8TEH3	1009 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RAB40A	Q8WXH6	277 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CENPI	Q92674	756 aa	Predicted RBP	5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SYAP1	Q96A49	352 aa	Predicted RBP	5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FUZ	Q9BT04	418 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ATP8A2	Q9NTI2	1148 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	IRAK4	Q9NWZ3	460 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	IL1RAPL1	Q9NZN1	696 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PNMA2	Q9UL42	364 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ODF2L	Q9ULJ1	636 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	OSGIN2	Q9Y236	505 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FLNC	Q14315	2725 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ADGRG4	Q8IZF6	3080 aa		5.19	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PLXNA4	Q9HCM2	1894 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278		A0A0G2JK05	382 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TMEM272	A0A1B0GTI8	110 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SLC15A5	A6NIM6	579 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TLX3	O43711	291 aa	Predicted RBP	5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	KIF5C	O60282	957 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	BAIAP3	O94812	1187 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	NDUFB8	O95169	186 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SERPINC1	P01008	464 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CD53	P19397	219 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TNFSF8	P32971	234 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TRPC1	P48995	793 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GTF2A1	P52655	376 aa	Predicted RBP	5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	HMGN5	P82970	282 aa	Known RBP	5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PKP1	Q13835	747 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GRB14	Q14449	540 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ME3	Q16798	604 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms