RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PDZD8Q8NEN9 1154 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 RHEBL1Q8TAI7 183 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 DNAJB14Q8TBM8 379 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 TMBIM1Q969X1 311 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 ISG20Q96AZ6 181 aaKnown RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 DCPSQ96C86 337 aaKnown RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 CGREF1Q99674 301 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 LRRC3Q9BY71 257 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 FBXO8Q9NRD0 319 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 ZIM2Q9NZV7 527 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 GIMAP2Q9UG22 337 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 PDE10AQ9Y233 779 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 PPP2R3BQ9Y5P8 575 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 PTGDR2Q9Y5Y4 395 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 FAM234BA2RU67 622 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 CCDC154A6NI56 674 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 C9JVG2 144 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 PFDN6O15212 129 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 SLC22A1O15245 554 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 TBC1D4O60343 1298 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 PMPCBO75439 489 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 S1PR4O95977 384 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 C1RP00736 705 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 NTRK1P04629 796 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 CYBBP04839 570 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 DPEP1P16444 411 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 IL7RP16871 459 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 S100A1P23297 94 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 BDNFP23560 247 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 HTR1BP28222 390 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 APLP1P51693 650 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 RAD23AP54725 363 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 CDH13P55290 713 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 FOXA1P55317 472 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 WNT3AP56704 352 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 CDC42EP1Q00587 391 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 LCP2Q13094 533 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 ACOX1Q15067 660 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 GRIK4Q16099 956 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 CTF1Q16619 201 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 FAM98BQ52LJ0 330 aaKnown RBP7.25□□□□□ -1.25
USP48-206ENST00000464577 XKR7Q5GH72 579 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 PAGE3Q5JUK9 113 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 OTUD3Q5T2D3 398 aaPredicted RBP7.25□□□□□ -1.25
USP48-206ENST00000464577 FAM219BQ5XKK7 198 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 AFMIDQ63HM1 303 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 TMEM214Q6NUQ4 689 aaKnown RBP7.25□□□□□ -1.25
USP48-206ENST00000464577 TAC4Q86UU9 113 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 ZBTB46Q86UZ6 589 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 LRRC49Q8IUZ0 686 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 CADM3Q8N126 398 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 CLEC4FQ8N1N0 589 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 SVOPLQ8N434 492 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 AADATQ8N5Z0 425 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 OR13J1Q8NGT2 312 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 PPTC7Q8NI37 304 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 EMID1Q96A84 441 aaPredicted RBP7.25□□□□□ -1.25
USP48-206ENST00000464577 SDCCAG3Q96C92 435 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 RNF145Q96MT1 663 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 MBOAT4Q96T53 435 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 SEPHS2Q99611 448 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 SMOQ99835 787 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 TOR3AQ9H497 397 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 NXF3Q9H4D5 531 aaKnown RBP7.25□□□□□ -1.25
USP48-206ENST00000464577 TFB2MQ9H5Q4 396 aaKnown RBP7.25□□□□□ -1.25
USP48-206ENST00000464577 CATSPERBQ9H7T0 1116 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 RMND5AQ9H871 391 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 PDGFCQ9NRA1 345 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 RBM22Q9NW64 420 aaKnown RBP eCLIP7.25□□□□□ -1.258e-10■■■■■ 42.3
USP48-206ENST00000464577 OSER1Q9NX31 292 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 ANKMY1Q9P2S6 941 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 DNMT3BQ9UBC3 853 aaKnown RBP7.25□□□□□ -1.25
USP48-206ENST00000464577 MTRRQ9UBK8 725 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 BAG5Q9UL15 447 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 TSC22D4Q9Y3Q8 395 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 PCDHGB1Q9Y5G3 927 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 SNX5Q9Y5X3 404 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 PTCH2Q9Y6C5 1203 aa7.25□□□□□ -1.25
USP48-206ENST00000464577 MROH6A6NGR9 719 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ASB14A6NK59 587 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 SLC22A3O75751 556 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 ANXA6P08133 673 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 USP17L7P0C7H9 530 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 LINC00032P0C843 101 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 PABPC1P11940 636 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 MTHFD2P13995 350 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 PTPN2P17706 415 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 PCMT1P22061 227 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 GRK3P35626 688 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 GRIK1P39086 918 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 SERPINB10P48595 397 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 SERPINH1P50454 418 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 POLR2JP52435 117 aaKnown RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 DIO3P55073 304 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 OR4D2P58180 307 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 LILRA4P59901 499 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 SOX4Q06945 474 aaPredicted RBP7.24□□□□□ -1.25
USP48-206ENST00000464577 CD300CQ08708 224 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 IL18R1Q13478 541 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 POLD3Q15054 466 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms