RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MYLKQ15746 1914 aa14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 COL5A1P20908 1838 aaPredicted RBP14.38□□□□□ -0.11
SQSTM1-205ENST00000464493 TCRBV7S3A2A0A539 114 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 HEATR9A2RTY3 570 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 DNAJC6O75061 913 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 PRAMEF1O95521 474 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 ZNF8P17098 575 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 ADRA1DP25100 572 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 ADCY8P40145 1251 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 PTGIRP43119 386 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 MAGEA6P43360 314 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 NPY2RP49146 381 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 SESN2P58004 480 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 XIAPP98170 497 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 KCNJ11Q14654 390 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 SKIDA1Q1XH10 827 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 PROX2Q3B8N5 592 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 CCDC38Q502W7 563 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 PYCR3Q53H96 274 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 ZNF648Q5T619 568 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 LRRC8BQ6P9F7 803 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 TAF8Q7Z7C8 310 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 ADGRG6Q86SQ4 1221 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 GALNT13Q8IUC8 556 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 FAM181AQ8N9Y4 354 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 GDAP1Q8TB36 358 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 GPBAR1Q8TDU6 330 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 CPT1BQ92523 772 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 CDKN2AIPNLQ96HQ2 116 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 DNAJC1Q96KC8 554 aaKnown RBP14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 RANBP9Q96S59 729 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 OR2AG1Q9H205 316 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 ASB8Q9H765 288 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 BFARQ9NZS9 450 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 SPTBN2O15020 2390 aa14.37□□□□□ -0.11
SQSTM1-205ENST00000464493 ZNF106Q9H2Y7 1883 aaKnown RBP14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 GOLGA4Q13439 2230 aaKnown RBP14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 GPR89AB7ZAQ6 455 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 H7C0S8 307 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 CCL22O00626 93 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 GPR39O43194 453 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 GRID2O43424 1007 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 VEGFDO43915 354 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 NUAK1O60285 661 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 MTX2O75431 263 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 TUBB4AP04350 444 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 GPR89BP0CG08 455 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 CKMT2P17540 419 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 PSMA3P25788 255 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 DR1Q01658 176 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 TMEM115Q12893 351 aaPredicted RBP14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 ILF3Q12906 894 aaKnown RBP eCLIP14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 NFATC2Q13469 925 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 PEX6Q13608 980 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 PTK6Q13882 451 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 LDLRAP1Q5SW96 308 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 ANKRD22Q5VYY1 191 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 ZCCHC8Q6NZY4 707 aaKnown RBP14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 SYDE1Q6ZW31 735 aaPredicted RBP14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 ERMP1Q7Z2K6 904 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 CCL4L1Q8NHW4 92 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 APOLD1Q96LR9 279 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 OR2M4Q96R27 311 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 GSDMCQ9BYG8 508 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 IL22Q9GZX6 179 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 ASIC3Q9UHC3 531 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 SLC30A1Q9Y6M5 507 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 CACNA1AO00555 2505 aa14.36□□□□□ -0.11
SQSTM1-205ENST00000464493 CCDC78A2IDD5 438 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 AGAP14A8MT82 685 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 CDK14O94921 469 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 FTH1P19P0C7X4 201 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 ITGALP20701 1170 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 MC4RP32245 332 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 CA5AP35218 305 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 DAB2P98082 770 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 CTBSQ01459 385 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 DNAJC3Q13217 504 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 KHDC1Q4VXA5 237 aaKnown RBP14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 PCID2Q5JVF3 399 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 C6orf132Q5T0Z8 1188 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 GPRC6AQ5T6X5 926 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 TSTD2Q5T7W7 516 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 N4BP2L1Q5TBK1 243 aaPredicted RBP14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 ZNF534Q76KX8 674 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 NLRP9Q7RTR0 991 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 SNX20Q7Z614 316 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 SLCO6A1Q86UG4 719 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 NRROSQ86YC3 692 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 MCUQ8NE86 351 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 FAM46DQ8NEK8 389 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 DDHD1Q8NEL9 900 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 SPATA4Q8NEY3 305 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 PPHLN1Q8NEY8 458 aaKnown RBP14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 GLMNQ92990 594 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 TTC25Q96NG3 672 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 KRT12Q99456 494 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 BOCQ9BWV1 1114 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 SMOXQ9NWM0 555 aa14.35□□□□□ -0.11
SQSTM1-205ENST00000464493 TOR4AQ9NXH8 423 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms