RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 YME1L1Q96TA2 773 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 NPY6RQ99463 290 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 HOPXQ9BPY8 73 aaPredicted RBP9.02□□□□□ -0.96
HPS4-208ENST00000464362 FEM1AQ9BSK4 669 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 HMG20AQ9NP66 347 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 GKN1Q9NS71 199 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 KRT84Q9NSB2 600 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 G3V2T6 193 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 J3QRK9 145 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 IRAK2O43187 625 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 CNTN5O94779 1100 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 FADS2O95864 444 aaKnown RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 OTCP00480 354 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 ATP6V0D1P61421 351 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 TRAF3Q13114 568 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 ACAP2Q15057 778 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 FAM174BQ3ZCQ3 159 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 ATXN7L2Q5T6C5 722 aaPredicted RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 KLHDC10Q6PID8 442 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 TBC1D21Q8IYX1 336 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 CLDN19Q8N6F1 224 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 HTRA1Q92743 480 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 FBXL8Q96CD0 374 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 PPP3R2Q96LZ3 170 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 C2orf49Q9BVC5 232 aaPredicted RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 TNKS2Q9H2K2 1166 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 TMEM245Q9H330 911 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 PREBQ9HCU5 417 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 CRTAC1Q9NQ79 661 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 EIF2B3Q9NR50 452 aaKnown RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 GIMAP4Q9NUV9 329 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 ZNF490Q9ULM2 529 aaPredicted RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 SIPA1L3O60292 1781 aaPredicted RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 A0A0G2JLL6 359 aaPredicted RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 H6PDO95479 791 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 OR56A5P0C7T3 313 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 PRKAR2AP13861 404 aaKnown RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 CYP2A7P20853 494 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 RRM2P31350 389 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 ELAVL2Q12926 359 aaKnown RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 GRIK3Q13003 919 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 BTG3Q14201 252 aaPredicted RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 PRRT2Q7Z6L0 340 aaPredicted RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 ANKRD23Q86SG2 305 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 PDSS2Q86YH6 399 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 NRG4Q8WWG1 115 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 HSPBAP1Q96EW2 488 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 FEM1CQ96JP0 617 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 SLC9A7Q96T83 725 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 PAAF1Q9BRP4 392 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 CCDC106Q9BWC9 280 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 NUAK2Q9H093 628 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 TRNAU1APQ9NX07 287 aaKnown RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 SLC25A13Q9UJS0 675 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 OGDHLQ9ULD0 1010 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 CNOT6Q9ULM6 557 aaKnown RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 TBC1D30Q9Y2I9 924 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 ADAMTS7Q9UKP4 1686 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 KLHL33A6NCF5 533 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 CDC7O00311 574 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 KPNA4O00629 521 aaPredicted RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 KPNA5O15131 536 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 IGSF6O95976 241 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 ASGR1P07306 291 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 RHOQP17081 205 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 UGT1A1P22309 533 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 UGT1A4P22310 534 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 SERPINA4P29622 427 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 UGT1A3P35503 534 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 UGT1A5P35504 534 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 TUFMP49411 452 aaKnown RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 BLVRAP53004 296 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 DIO3P55073 304 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 RPS7P62081 194 aaKnown RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 ENPEPQ07075 957 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 DMPKQ09013 629 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 CEACAM7Q14002 265 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 LAPTM4AQ15012 233 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 ACOX1Q15067 660 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 DGUOKQ16854 277 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 ZNF549Q6P9A3 640 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 GPRIN1Q7Z2K8 1008 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 SETD9Q8NE22 299 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 ZHX1-C8orf76Q96EF9 292 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 R3HDMLQ9H3Y0 253 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 FCF1Q9Y324 198 aaKnown RBP9.02□□□□□ -0.97
HPS4-208ENST00000464362 DYRK1BQ9Y463 629 aa9.02□□□□□ -0.97
HPS4-208ENST00000464362 hCG_2039718K7EN88 272 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 TACR2P21452 398 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 GDF5P43026 501 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 ETV4P43268 484 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 AIF1P55008 147 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 BNIP3Q12983 259 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 EGFLAMQ63HQ2 1017 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 KIAA0930Q6ICG6 404 aaPredicted RBP9.01□□□□□ -0.97
HPS4-208ENST00000464362 CRTC3Q6UUV7 619 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 TMC5Q6UXY8 1006 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 KIAA0408Q6ZU52 694 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms