RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CHST15Q7LFX5 561 aaPredicted RBP12.84□□□□□ -0.35
XRN1-203ENST00000463916 B3GNT8Q7Z7M8 397 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 ARL14Q8N4G2 192 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 GLYATL1Q969I3 302 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 TMEM121Q9BTD3 319 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 OR2AG1Q9H205 316 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 TRABDQ9H4I3 376 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 SYNDIG1Q9H7V2 258 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 URB1O60287 2271 aaKnown RBP12.84□□□□□ -0.35
XRN1-203ENST00000463916 KIF26BQ2KJY2 2108 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 GOLGA6L9A6NEM1 432 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 C5orf60A6NFR6 353 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 NUDT21O43809 227 aaKnown RBP12.84□□□□□ -0.35
XRN1-203ENST00000463916 NUAK1O60285 661 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 ANXA9O76027 345 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 METTL18O95568 372 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 RPLP0P05388 317 aaKnown RBP12.84□□□□□ -0.35
XRN1-203ENST00000463916 CCDC175P0C221 793 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 ZNF569Q5MCW4 686 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 DENND5AQ6IQ26 1287 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 ZNF662Q6ZS27 426 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 ADGRG6Q86SQ4 1221 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 TTC13Q8NBP0 860 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 PLEKHG4BQ96PX9 1271 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 SRPK1Q96SB4 655 aaKnown RBP12.84□□□□□ -0.35
XRN1-203ENST00000463916 FERMT1Q9BQL6 677 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 FOXP3Q9BZS1 431 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 TRIM39Q9HCM9 518 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 ATXN7L1Q9ULK2 861 aaPredicted RBP12.84□□□□□ -0.35
XRN1-203ENST00000463916 KCTD3Q9Y597 815 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 ARL5AQ9Y689 179 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 UNC13CQ8NB66 2214 aa12.83□□□□□ -0.35
XRN1-203ENST00000463916 TRBV23OR9-2A0A075B6M9 112 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 GAPDHSO14556 408 aaPredicted RBP12.83□□□□□ -0.36
XRN1-203ENST00000463916 PPM1DO15297 605 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 B4GAT1O43505 415 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 TLX3O43711 291 aaPredicted RBP12.83□□□□□ -0.36
XRN1-203ENST00000463916 TCEA3O75764 348 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 STK10O94804 968 aaKnown RBP12.83□□□□□ -0.36
XRN1-203ENST00000463916 TNNT3P45378 269 aaPredicted RBP12.83□□□□□ -0.36
XRN1-203ENST00000463916 B4GALNT1Q00973 533 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 SPIDRQ14159 915 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 TMPRSS9Q7Z410 1059 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 GLT6D1Q7Z4J2 308 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 SPRED1Q7Z699 444 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 CCNJLQ8IV13 435 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 KLHDC8BQ8IXV7 354 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 OR6C4Q8NGE1 309 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 CARD9Q9H257 536 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 LRRN3Q9H3W5 708 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 GRPEL1Q9HAV7 217 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 RAD18Q9NS91 495 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 TBC1D29Q9UFV1 150 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 SLC23A2Q9UGH3 650 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 KCNK6Q9Y257 313 aa12.83□□□□□ -0.36
XRN1-203ENST00000463916 AAR2Q9Y312 384 aaKnown RBP12.83□□□□□ -0.36
XRN1-203ENST00000463916 ZFC3H1O60293 1989 aaKnown RBP12.83□□□□□ -0.36
XRN1-203ENST00000463916 GRID2O43424 1007 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 UGT1A9O60656 530 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 ACP5P13686 325 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 PNLIPP16233 465 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 UGT1A6P19224 532 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 UGT1A1P22309 533 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 UGT1A4P22310 534 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 UGT1A3P35503 534 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 UGT1A5P35504 534 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 OR1D5P58170 312 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 LRP8Q14114 963 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 CHRNA6Q15825 494 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 KCTD11Q693B1 232 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 PDPK2PQ6A1A2 396 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 SLC13A5Q86YT5 568 aaPredicted RBP12.82□□□□□ -0.36
XRN1-203ENST00000463916 ZNF547Q8IVP9 402 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 TAB3Q8N5C8 712 aaPredicted RBP12.82□□□□□ -0.36
XRN1-203ENST00000463916 RMI1Q9H9A7 625 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 UGT1A7Q9HAW7 530 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 UGT1A10Q9HAW8 530 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 UGT1A8Q9HAW9 530 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 HACD3Q9P035 362 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 SATB2Q9UPW6 733 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 ZFYVE26Q68DK2 2539 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 D6RAR5 112 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 CHUKO15111 745 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 GABREP78334 506 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 PRPSAP1Q14558 356 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 RPS6KA1Q15418 735 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 FAM151BQ6UXP7 276 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 MICALCLQ6ZW33 695 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 ZNF438Q7Z4V0 828 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 C1orf54Q8WWF1 131 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 PRR11Q96HE9 360 aaPredicted RBP12.82□□□□□ -0.36
XRN1-203ENST00000463916 VPS35Q96QK1 796 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 GFM1Q96RP9 751 aaKnown RBP12.82□□□□□ -0.36
XRN1-203ENST00000463916 RDH14Q9HBH5 336 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 RALYQ9UKM9 306 aaKnown RBP12.82□□□□□ -0.36
XRN1-203ENST00000463916 PPP2R2CQ9Y2T4 447 aa12.82□□□□□ -0.36
XRN1-203ENST00000463916 LIASO43766 372 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 ALDH4A1P30038 563 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 SPAM1P38567 509 aa12.81□□□□□ -0.36
XRN1-203ENST00000463916 LSSP48449 732 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms