RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 CD1AP06126 327 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 ITGA2BP08514 1039 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 ITGA5P08648 1049 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 GAAP10253 952 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 CHRNB1P11230 501 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 TACR2P21452 398 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 PSMA2P25787 234 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 CYLC1P35663 651 aaPredicted RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 OPRD1P41143 372 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 TSPAN7P41732 249 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 MAGEA9P43362 315 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 RPS9P46781 194 aaKnown RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 MRE11P49959 708 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 ATXN1P54253 815 aaKnown RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 AIF1P55008 147 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 VCPP55072 806 aaKnown RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 HDAC4P56524 1084 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 GSDMDP57764 484 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 FZD5Q13467 585 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 ACAP1Q15027 740 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 SPA17Q15506 151 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 CDO1Q16878 200 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 C15orf59Q2T9L4 293 aaPredicted RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 FBXO43Q4G163 708 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 RAP1GAP2Q684P5 730 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 NADSYN1Q6IA69 706 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 FBXL22Q6P050 247 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 HEATR4Q86WZ0 1026 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 CHSY1Q86X52 802 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 FAM131BQ86XD5 332 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 CCDC117Q8IWD4 279 aaPredicted RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 MAML1Q92585 1016 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 NTAN1Q96AB6 310 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 CLDN23Q96B33 292 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 HAPLN3Q96S86 360 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 PRMT1Q99873 361 aaKnown RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 BAG1Q99933 345 aaPredicted RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 NCAPGQ9BPX3 1015 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 NUP85Q9BW27 656 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 LMAN1LQ9HAT1 526 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 SMURF2Q9HAU4 748 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 FBRSL1Q9HCM7 1045 aaKnown RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 DNAJC17Q9NVM6 304 aaKnown RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 SPATA6Q9NWH7 488 aaPredicted RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 PLK2Q9NYY3 685 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 UVRAGQ9P2Y5 699 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 XPO7Q9UIA9 1087 aaKnown RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 LCMT1Q9UIC8 334 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 ZFP69BQ9UJL9 534 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 FBXO10Q9UK96 956 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 NDRG2Q9UN36 371 aaKnown RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 MTF2Q9Y483 593 aaPredicted RBP6.91□□□□□ -1.3
VPS8-216ENST00000463687 TTLL3Q9Y4R7 772 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 HS3ST4Q9Y661 456 aa6.91□□□□□ -1.3
VPS8-216ENST00000463687 MTCL1Q9Y4B5 1905 aaKnown RBP6.9□□□□□ -1.3
VPS8-216ENST00000463687 NOTCH4Q99466 2003 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 KRTAP4-8A0A0G2JLE6 195 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 A0A0G2JNJ9 132 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 TBC1D3BA6NDS4 549 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 MBD3L4A6NDZ8 208 aaPredicted RBP6.9□□□□□ -1.3
VPS8-216ENST00000463687 MBD3L3A6NE82 208 aaPredicted RBP6.9□□□□□ -1.3
VPS8-216ENST00000463687 EIF3CLB5ME19 914 aaKnown RBP6.9□□□□□ -1.3
VPS8-216ENST00000463687 MYO1CO00159 1063 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 PI15O43692 258 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 KAT7O95251 611 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 TNFRSF6BO95407 300 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 ABHD16AO95870 558 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 EGFP01133 1207 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 APODP05090 189 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 DCNP07585 359 aaKnown RBP6.9□□□□□ -1.3
VPS8-216ENST00000463687 CISD3P0C7P0 127 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 CD8BP10966 210 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 HNRNPLP14866 589 aaKnown RBP eCLIP6.9□□□□□ -1.3
VPS8-216ENST00000463687 HOXD9P28356 352 aaPredicted RBP6.9□□□□□ -1.3
VPS8-216ENST00000463687 AVPR2P30518 371 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 SLC6A4P31645 630 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 CRHR1P34998 444 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 ADRA1BP35368 520 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 PCK1P35558 622 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 MAGEA1P43355 309 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 MAPKAPK2P49137 400 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 WNT3AP56704 352 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 ERVFRD-1P60508 538 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 OGDHQ02218 1023 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 SCAPQ12770 1279 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 EFR3AQ14156 821 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 PIGHQ14442 188 aaPredicted RBP6.9□□□□□ -1.3
VPS8-216ENST00000463687 C5orf22Q49AR2 442 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 RABGAP1LQ5R372 815 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 NAIF1Q69YI7 327 aaPredicted RBP6.9□□□□□ -1.3
VPS8-216ENST00000463687 SCYL2Q6P3W7 929 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 RFWD3Q6PCD5 774 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 ZC3H14Q6PJT7 736 aaKnown RBP6.9□□□□□ -1.3
VPS8-216ENST00000463687 LRRC31Q6UY01 552 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 RPTNQ6XPR3 784 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 SLFN11Q7Z7L1 901 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 MFN1Q8IWA4 741 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 RHOT2Q8IXI1 618 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 CCDC105Q8IYK2 499 aa6.9□□□□□ -1.3
VPS8-216ENST00000463687 LGI2Q8N0V4 545 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms