RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 ADNPQ9H2P0 1102 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 NT5MQ9NPB1 228 aa23.04■■□□□ 1.28
SSNA1-203ENST00000463511 TRBV23OR9-2A0A075B6M9 112 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 TNNT1P13805 278 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 POLE2P56282 527 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 GPLD1P80108 840 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 KRT81Q14533 505 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 PYCR3Q53H96 274 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 TMEM71Q6P5X7 295 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 PTRH1Q86Y79 214 aaKnown RBP23.03■■□□□ 1.28
SSNA1-203ENST00000463511 NRSN1Q8IZ57 195 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 KCTD6Q8NC69 237 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 AHCYL2Q96HN2 611 aaKnown RBP23.03■■□□□ 1.28
SSNA1-203ENST00000463511 AGAP2Q99490 1192 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 ASPSCR1Q9BZE9 553 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 LZTFL1Q9NQ48 299 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 PPIL1Q9Y3C6 166 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 CAPN6Q9Y6Q1 641 aa23.03■■□□□ 1.28
SSNA1-203ENST00000463511 RAD1O60671 282 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 EML2O95834 649 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 KDELR1P24390 212 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 SERPINB6P35237 376 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 FASLGP48023 281 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 MMRN1Q13201 1228 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 KCNAB2Q13303 367 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 DPYSL3Q14195 570 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 PDK2Q15119 407 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 SNAP47Q5SQN1 464 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 DCAF12Q5T6F0 453 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 ANKS6Q68DC2 871 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 GALNT13Q8IUC8 556 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 RAPGEF5Q92565 580 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 SLC38A3Q99624 504 aa23.02■■□□□ 1.28
SSNA1-203ENST00000463511 B4E171 279 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 INPP4BO15327 924 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 PSTPIP1O43586 416 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 DUX1O43812 170 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 MAP3K6O95382 1288 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 TSPAN7P41732 249 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 RAB15P59190 212 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 PTSQ03393 145 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 ITKQ08881 620 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 NT5DC3Q86UY8 548 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 NDUFAF2Q8N183 169 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 SFRP1Q8N474 314 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.01■■□□□ 1.27
SSNA1-203ENST00000463511 BMPERQ8N8U9 685 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 OR10G6Q8NH81 332 aa23.01■■□□□ 1.27
SSNA1-203ENST00000463511 DDX56Q9NY93 547 aaKnown RBP23.01■■□□□ 1.27
SSNA1-203ENST00000463511 RCOR3Q9P2K3 495 aaPredicted RBP23.01■■□□□ 1.27
SSNA1-203ENST00000463511 A0A0J9YYE9 177 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 C3orf70A6NLC5 250 aaPredicted RBP23■■□□□ 1.27
SSNA1-203ENST00000463511 A8MU76 341 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 FZD6O60353 706 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 TRBC1P01850 177 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 ZNF30P17039 623 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 MARCKSL1P49006 195 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 LRP8Q14114 963 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 ZNF765Q7L2R6 523 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 REXO1L1PQ8IX06 675 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 KRT35Q92764 455 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 COX14Q96I36 57 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 CTRCQ99895 268 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 PILRAQ9UKJ1 303 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 PRKAB1Q9Y478 270 aa23■■□□□ 1.27
SSNA1-203ENST00000463511 PCYT1BQ9Y5K3 369 aaPredicted RBP23■■□□□ 1.27
SSNA1-203ENST00000463511 RELNP78509 3460 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 ZNF891A8MT65 544 aaPredicted RBP22.99■■□□□ 1.27
SSNA1-203ENST00000463511 ASMTLO95671 621 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 CCR10P46092 362 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 STC1P52823 247 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 EPHB1P54762 984 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 COLEC12Q5KU26 742 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.99■■□□□ 1.27
SSNA1-203ENST00000463511 ZFYVE27Q5T4F4 411 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 MAP7D3Q8IWC1 876 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 SYCE1Q8N0S2 351 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 TEX26Q8N6G2 289 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 FAF2Q96CS3 445 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 RTP4Q96DX8 246 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 RIOK2Q9BVS4 552 aaKnown RBP22.99■■□□□ 1.27
SSNA1-203ENST00000463511 POLR1EQ9GZS1 481 aaKnown RBP22.99■■□□□ 1.27
SSNA1-203ENST00000463511 PDP2Q9P2J9 529 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 ZNHIT2Q9UHR6 403 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 AMFRQ9UKV5 643 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 PYCARDQ9ULZ3 195 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 PCDHA3Q9Y5H8 950 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 NBASA2RRP1 2371 aa22.99■■□□□ 1.27
SSNA1-203ENST00000463511 LRRD1A4D1F6 860 aa22.98■■□□□ 1.27
SSNA1-203ENST00000463511 MFSD11O43934 449 aa22.98■■□□□ 1.27
SSNA1-203ENST00000463511 KRT1P04264 644 aa22.98■■□□□ 1.27
SSNA1-203ENST00000463511 ATP1A1P05023 1023 aaKnown RBP22.98■■□□□ 1.27
SSNA1-203ENST00000463511 PYGLP06737 847 aa22.98■■□□□ 1.27
SSNA1-203ENST00000463511 CTNNA2P26232 953 aa22.98■■□□□ 1.27
SSNA1-203ENST00000463511 CTNNA1P35221 906 aaKnown RBP22.98■■□□□ 1.27
SSNA1-203ENST00000463511 HHEXQ03014 270 aa22.98■■□□□ 1.27
SSNA1-203ENST00000463511 IHHQ14623 411 aa22.98■■□□□ 1.27
SSNA1-203ENST00000463511 SKIDA1Q1XH10 827 aa22.98■■□□□ 1.27
SSNA1-203ENST00000463511 ANKRD20A8PQ5CZ79 823 aa22.98■■□□□ 1.27
SSNA1-203ENST00000463511 PEX26Q7Z412 305 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms