RNA–Protein interactions for RNA: ENST00000463093.5

SSBP1-203, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-203ENST00000463093 RANBP9Q96S59 729 aa13.49□□□□□ -0.25
SSBP1-203ENST00000463093 NLE1Q9NVX2 485 aaPredicted RBP13.49□□□□□ -0.25
SSBP1-203ENST00000463093 ATXN10Q9UBB4 475 aa13.49□□□□□ -0.25
SSBP1-203ENST00000463093 FTSJ1Q9UET6 329 aa13.49□□□□□ -0.25
SSBP1-203ENST00000463093 FKBPLQ9UIM3 349 aa13.49□□□□□ -0.25
SSBP1-203ENST00000463093 APPL1Q9UKG1 709 aa13.49□□□□□ -0.25
SSBP1-203ENST00000463093 RIMKLBQ9ULI2 386 aa13.49□□□□□ -0.25
SSBP1-203ENST00000463093 GPR89AB7ZAQ6 455 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 VEGFDO43915 354 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 NUAK1O60285 661 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 SRP72O76094 671 aaKnown RBP13.48□□□□□ -0.25
SSBP1-203ENST00000463093 TUBB4AP04350 444 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 GPR89BP0CG08 455 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 CKMT2P17540 419 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 CA5AP35218 305 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 GNPDA1P46926 289 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 SARNPP82979 210 aaKnown RBP13.48□□□□□ -0.25
SSBP1-203ENST00000463093 TMPRSS15P98073 1019 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 PEX6Q13608 980 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 ITGA9Q13797 1035 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 SEPT6Q14141 434 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 LRRC8BQ6P9F7 803 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 OGFOD3Q6PK18 319 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 SYDE1Q6ZW31 735 aaPredicted RBP13.48□□□□□ -0.25
SSBP1-203ENST00000463093 MARK2Q7KZI7 788 aaKnown RBP13.48□□□□□ -0.25
SSBP1-203ENST00000463093 NLRP9Q7RTR0 991 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 ERMP1Q7Z2K6 904 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 TAF8Q7Z7C8 310 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 SLCO6A1Q86UG4 719 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 GKN2Q86XP6 184 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 KLHL7Q8IXQ5 586 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 CCL4L1Q8NHW4 92 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 CPT1BQ92523 772 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 DNAJC1Q96KC8 554 aaKnown RBP13.48□□□□□ -0.25
SSBP1-203ENST00000463093 OR2AG1Q9H205 316 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 ARFGAP3Q9NP61 516 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 BFARQ9NZS9 450 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 ZNHIT2Q9UHR6 403 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 DOLKQ9UPQ8 538 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 GPSM3Q9Y4H4 160 aa13.48□□□□□ -0.25
SSBP1-203ENST00000463093 HEATR9A2RTY3 570 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 AGAP14A8MT82 685 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 H7C0S8 307 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 CCL22O00626 93 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 CHUKO15111 745 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 CDK14O94921 469 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 ZNF8P17098 575 aaPredicted RBP13.47□□□□□ -0.25
SSBP1-203ENST00000463093 SESN2P58004 480 aaPredicted RBP13.47□□□□□ -0.25
SSBP1-203ENST00000463093 CTBSQ01459 385 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 TMEM115Q12893 351 aaPredicted RBP13.47□□□□□ -0.25
SSBP1-203ENST00000463093 PPP1R7Q15435 360 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 KHDC1Q4VXA5 237 aaKnown RBP13.47□□□□□ -0.25
SSBP1-203ENST00000463093 CCDC38Q502W7 563 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 PCID2Q5JVF3 399 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 LDLRAP1Q5SW96 308 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 TSTD2Q5T7W7 516 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 ANKRD22Q5VYY1 191 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 ZCCHC8Q6NZY4 707 aaKnown RBP13.47□□□□□ -0.25
SSBP1-203ENST00000463093 NRROSQ86YC3 692 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 GALNT13Q8IUC8 556 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 PHYKPLQ8IUZ5 450 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 FAM46DQ8NEK8 389 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 APOLD1Q96LR9 279 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 C16orf45Q96MC5 204 aaPredicted RBP13.47□□□□□ -0.25
SSBP1-203ENST00000463093 OR2M4Q96R27 311 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 BOCQ9BWV1 1114 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 GSDMCQ9BYG8 508 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 ASB8Q9H765 288 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 SUDS3Q9H7L9 328 aaPredicted RBP13.47□□□□□ -0.25
SSBP1-203ENST00000463093 SMOXQ9NWM0 555 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 GPR34Q9UPC5 381 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 PLEKHM1Q9Y4G2 1056 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 RP1P56715 2156 aa13.47□□□□□ -0.25
SSBP1-203ENST00000463093 NCOR2Q9Y618 2525 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 TP53BP1Q12888 1972 aaPredicted RBP13.46□□□□□ -0.25
SSBP1-203ENST00000463093 LY6G6EA0A0G2JKS1 128 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 GRID2O43424 1007 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 MTX2O75431 263 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 DKK1O94907 266 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 PRAMEF1O95521 474 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 CKMT1AP12532 417 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 IVDP26440 423 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 ARSDP51689 593 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 TERF1P54274 439 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 ILF3Q12906 894 aaKnown RBP eCLIP13.46□□□□□ -0.25
SSBP1-203ENST00000463093 NFATC2Q13469 925 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 PTK6Q13882 451 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 LRP8Q14114 963 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 TCEA2Q15560 299 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 GPR33Q49SQ1 333 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 C6orf132Q5T0Z8 1188 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 GPRC6AQ5T6X5 926 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 ZNF534Q76KX8 674 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 SNX20Q7Z614 316 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 CAND1Q86VP6 1230 aaKnown RBP13.46□□□□□ -0.25
SSBP1-203ENST00000463093 NAT8LQ8N9F0 302 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 DDHD1Q8NEL9 900 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 SPATA4Q8NEY3 305 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 GDAP1Q8TB36 358 aa13.46□□□□□ -0.25
SSBP1-203ENST00000463093 PEX13Q92968 403 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms