RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 ZNF157P51786 506 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-208ENST00000463007 UFM1P61960 85 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 DGCR6Q14129 220 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 LAPTM4AQ15012 233 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 LARP4Q71RC2 724 aaKnown RBP eCLIP12.36□□□□□ -0.43
HDAC4-208ENST00000463007 PSD4Q8NDX1 1056 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 LZICQ8WZA0 190 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 CENPNQ96H22 339 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-208ENST00000463007 TBCDQ9BTW9 1192 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 SMURF2Q9HAU4 748 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 PADI4Q9UM07 663 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 CFAP99D6REC4 459 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 GNGT2O14610 69 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 CDK14O94921 469 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 GPX3P22352 226 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 CD52P31358 61 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 HADHAP40939 763 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 BRCC3P46736 316 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 AGTR2P50052 363 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 KPNA2P52292 529 aaKnown RBP12.36□□□□□ -0.43
HDAC4-208ENST00000463007 MLLT10P55197 1068 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 UNC50Q53HI1 259 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 ANKRD26P1Q6NSI1 321 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 CROCCP3Q8IVE0 287 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 RSPH1Q8WYR4 309 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 GLT1D1Q96MS3 346 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 SMIM14Q96QK8 99 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 ARHGAP39Q9C0H5 1083 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 PRM3Q9NNZ6 103 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 PRDM8Q9NQV8 689 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 NSMCE4AQ9NXX6 385 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 F8W810 466 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 J3KR12 359 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 IRAK2O43187 625 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 ADAM23O75077 832 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 ANXA9O76027 345 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 LDLRP01130 860 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 BMP2P12643 396 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 PAX3P23760 479 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 CST5P28325 142 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-208ENST00000463007 POU4F1Q01851 419 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 PGS1Q32NB8 556 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 TRAF7Q6Q0C0 670 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 CCDC81Q6ZN84 652 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 CIR1Q86X95 450 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-208ENST00000463007 SCN4BQ8IWT1 228 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 TNIP2Q8NFZ5 429 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 GPR152Q8TDT2 470 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 SEPT8Q92599 483 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 TANKQ92844 425 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 BORCS5Q969J3 196 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 GFM2Q969S9 779 aaKnown RBP12.36□□□□□ -0.43
HDAC4-208ENST00000463007 SUSD3Q96L08 255 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 FCRL2Q96LA5 508 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-208ENST00000463007 CHID1Q9BWS9 393 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 AGPAT4Q9NRZ5 378 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 CNOT11Q9UKZ1 510 aaKnown RBP12.36□□□□□ -0.43
HDAC4-208ENST00000463007 GABRQQ9UN88 632 aa12.36□□□□□ -0.43
HDAC4-208ENST00000463007 SEPT4O43236 478 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 PAGE1O75459 146 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 CDH3P22223 829 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 PIK3CGP48736 1102 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 KCNK10P57789 538 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 TRAP1Q12931 704 aaKnown RBP12.35□□□□□ -0.43
HDAC4-208ENST00000463007 TRIM32Q13049 653 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 GALNT3Q14435 633 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 CYBRD1Q53TN4 286 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 ISCA2Q86U28 154 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 ADGRG5Q8IZF4 528 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 ANKFN1Q8N957 763 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 FIG4Q92562 907 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 ABHD8Q96I13 439 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 MRGPRX2Q96LB1 330 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 BIRC8Q96P09 236 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 SMOC2Q9H3U7 446 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 TSC22D4Q9Y3Q8 395 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 ARL5AQ9Y689 179 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 A0A087X1B8 175 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 AZIN1O14977 448 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 SLC22A2O15244 555 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 KATNA1O75449 491 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 RBP1P09455 135 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 CYP2C18P33260 490 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 OR4D2P58180 307 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 TUBA4AP68366 448 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 SLC10A7Q0GE19 358 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 NFATC3Q12968 1075 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 TUSC3Q13454 348 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 RBBP7Q16576 425 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 MEP1AQ16819 746 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 SLC36A3Q495N2 470 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 ZNF678Q5SXM1 525 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 SLC2A7Q6PXP3 512 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 NCCRP1Q6ZVX7 275 aaPredicted RBP12.35□□□□□ -0.43
HDAC4-208ENST00000463007 SCD5Q86SK9 330 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 C14orf80Q86SX3 495 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 C2CD4AQ8NCU7 369 aaPredicted RBP12.35□□□□□ -0.43
HDAC4-208ENST00000463007 ACDQ96AP0 544 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 IL12RB2Q99665 862 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 LHPPQ9H008 270 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms