RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 TIMM22Q9Y584 194 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 GABBR2O75899 941 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 RECQL4O94761 1208 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 FGF3P11487 239 aaPredicted RBP15.72■□□□□ 0.11
SMC4-204ENST00000462787 ATF4P18848 351 aaPredicted RBP15.72■□□□□ 0.11
SMC4-204ENST00000462787 GLUD2P49448 558 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 IRF9Q00978 393 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 CCDC157Q569K6 752 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 TRIM40Q6P9F5 258 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 NRG4Q8WWG1 115 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 NSMCE3Q96MG7 304 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 A0A1B0GVG6 124 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 E7ESA3 106 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 NOBOXO60393 691 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 EGFRP00533 1210 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 GLDCP23378 1020 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 IL1R2P27930 398 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 TAS2R39P59534 338 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 TPRG1LQ5T0D9 272 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 FKBP1CQ5VVH2 108 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 EEF1DP3Q658K8 133 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 FAM91A1Q658Y4 838 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 ZC3H7AQ8IWR0 971 aaKnown RBP15.72■□□□□ 0.11
SMC4-204ENST00000462787 CCDC36Q8IYA8 594 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 IZUMO1Q8IYV9 350 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 UTP4Q969X6 686 aaKnown RBP15.72■□□□□ 0.11
SMC4-204ENST00000462787 B3GNT5Q9BYG0 378 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 MYH8P13535 1937 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 A0A1W2PRG6 482 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 PCP4L1A6NKN8 68 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 C9JVG2 144 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 RFPL1O75677 317 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 AP2A2O94973 939 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 ALDH3A2P51648 485 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 PSMD4P55036 377 aaKnown RBP15.71■□□□□ 0.11
SMC4-204ENST00000462787 RASSF6Q6ZTQ3 369 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 AURKBQ96GD4 344 aaPredicted RBP15.71■□□□□ 0.11
SMC4-204ENST00000462787 SEMA3CQ99985 751 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 NLNQ9BYT8 704 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 DTLQ9NZJ0 730 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 FAM92AA1XBS5 289 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 OR10H3O60404 316 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 MTHFD1P11586 935 aaKnown RBP15.71■□□□□ 0.11
SMC4-204ENST00000462787 PTPN3P26045 913 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 HKDC1Q2TB90 917 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 DACT2Q5SW24 774 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 RETSATQ6NUM9 610 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 CXXC5Q7LFL8 322 aaKnown RBP15.71■□□□□ 0.11
SMC4-204ENST00000462787 CARNMT1Q8N4J0 409 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 EEF1AKMT1Q8WVE0 214 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 KBTBD7Q8WVZ9 684 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 ADAMTS10Q9H324 1103 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 LRTM1Q9HBL6 345 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 SCAF8Q9UPN6 1271 aaKnown RBP15.71■□□□□ 0.11
SMC4-204ENST00000462787 ISPDA4D126 451 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 SPTLC1O15269 473 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 CYP7B1O75881 506 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 C9P02748 559 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 PTX3P26022 381 aaPredicted RBP15.71■□□□□ 0.11
SMC4-204ENST00000462787 HOXD13P35453 343 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 ALDH9A1P49189 494 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 GAD2Q05329 585 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 SULT2A1Q06520 285 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 DCLRE1AQ6PJP8 1040 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 DNAJB8Q8NHS0 232 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 TMEM159Q96B96 161 aa15.71■□□□□ 0.11
SMC4-204ENST00000462787 IGKV6D-41A0A0C4DH26 115 aa15.71■□□□□ 0.1
SMC4-204ENST00000462787 H0YAE9 185 aa15.71■□□□□ 0.1
SMC4-204ENST00000462787 RSL1D1O76021 490 aaKnown RBP15.71■□□□□ 0.1
SMC4-204ENST00000462787 SLC15A1P46059 708 aa15.71■□□□□ 0.1
SMC4-204ENST00000462787 CD97P48960 835 aa15.71■□□□□ 0.1
SMC4-204ENST00000462787 GMFBP60983 142 aa15.71■□□□□ 0.1
SMC4-204ENST00000462787 NRG1Q02297 640 aaPredicted RBP15.71■□□□□ 0.1
SMC4-204ENST00000462787 ZDHHC21Q8IVQ6 265 aa15.71■□□□□ 0.1
SMC4-204ENST00000462787 GALNT12Q8IXK2 581 aa15.71■□□□□ 0.1
SMC4-204ENST00000462787 SENP8Q96LD8 212 aa15.71■□□□□ 0.1
SMC4-204ENST00000462787 ZYG11BQ9C0D3 744 aa15.71■□□□□ 0.1
SMC4-204ENST00000462787 EXD2Q9NVH0 621 aa15.71■□□□□ 0.1
SMC4-204ENST00000462787 AKAP7Q9P0M2 348 aaPredicted RBP15.71■□□□□ 0.1
SMC4-204ENST00000462787 ZDHHC2Q9UIJ5 367 aa15.71■□□□□ 0.1
SMC4-204ENST00000462787 RBM47A0AV96 593 aaKnown RBP15.7■□□□□ 0.1
SMC4-204ENST00000462787 TNFRSF11BO00300 401 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 ENDOD1O94919 500 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 PRLP01236 227 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 DNASE1L3Q13609 305 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 TIGD6Q17RP2 521 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 BRMS1LQ5PSV4 323 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 OTOP3Q7RTS5 596 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 TMBIM1Q969X1 311 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 HACL1Q9UJ83 578 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 DERAQ9Y315 318 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 COL5A2P05997 1499 aaPredicted RBP15.7■□□□□ 0.1
SMC4-204ENST00000462787 SGTAO43765 313 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 HOXA10P31260 410 aaPredicted RBP15.7■□□□□ 0.1
SMC4-204ENST00000462787 BOP1Q14137 746 aaKnown RBP15.7■□□□□ 0.1
SMC4-204ENST00000462787 DPYSL2Q16555 572 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 DDI2Q5TDH0 399 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 TXNRD3NBQ6F5E7 133 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 CHSY3Q70JA7 882 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 HID1Q8IV36 788 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms