RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 H2AFZP0C0S5 128 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 F3P13726 295 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 ARSEP51690 589 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 NIPAL4Q0D2K0 466 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 KCNAB2Q13303 367 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 CLCA4Q14CN2 919 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 IQCB1Q15051 598 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 ATP13A4Q4VNC1 1196 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 ODF2Q5BJF6 829 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 ZNF569Q5MCW4 686 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 HENMT1Q5T8I9 393 aaKnown RBP15.23■□□□□ 0.03
SKA3-204ENST00000462482 CCDC70Q6NSX1 233 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 H2AFVQ71UI9 128 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 TRIM48Q8IWZ4 208 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 HDAC11Q96DB2 347 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 SLC45A3Q96JT2 553 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 SPATA16Q9BXB7 569 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 MAK16Q9BXY0 300 aaKnown RBP15.23■□□□□ 0.03
SKA3-204ENST00000462482 OSGEPL1Q9H4B0 414 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 KLHL3Q9UH77 587 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 TUBD1Q9UJT1 453 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 OAS3Q9Y6K5 1087 aaKnown RBP15.23■□□□□ 0.03
SKA3-204ENST00000462482 LRP4O75096 1905 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 GPR89AB7ZAQ6 455 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 TERTO14746 1132 aaKnown RBP15.22■□□□□ 0.03
SKA3-204ENST00000462482 NUAK1O60285 661 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 SLC25A14O95258 325 aaPredicted RBP15.22■□□□□ 0.03
SKA3-204ENST00000462482 EML2O95834 649 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 TPM3P06753 285 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 GPR89BP0CG08 455 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 ARSDP51689 593 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 POLE2P56282 527 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 GBE1Q04446 702 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 QPCTQ16769 361 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 ARHGAP22Q7Z5H3 698 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 RTP4Q96DX8 246 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 CTRCQ99895 268 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 ZSCAN5AQ9BUG6 496 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 ZFYVE1Q9HBF4 777 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 FBXO8Q9NRD0 319 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 CPNE7Q9UBL6 633 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 PILRAQ9UKJ1 303 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 KIF26BQ2KJY2 2108 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 AHCTF1Q8WYP5 2266 aa15.22■□□□□ 0.03
SKA3-204ENST00000462482 ATMQ13315 3056 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 PIEZO2Q9H5I5 2752 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 FADS2P1A8MWK0 482 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 KCNK1O00180 336 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 STK17BO94768 372 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 VIPP01282 170 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 ABHD18Q0P651 414 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 SEPT6Q14141 434 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 INSCQ1MX18 579 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 ALS2CLQ60I27 953 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 BMPERQ8N8U9 685 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 FAF2Q96CS3 445 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 GPR63Q9BZJ6 419 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 OR2AG1Q9H205 316 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 DEF6Q9H4E7 631 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 CBX8Q9HC52 389 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 KLC4Q9NSK0 619 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 DTLQ9NZJ0 730 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 CNOT6Q9ULM6 557 aaKnown RBP15.21■□□□□ 0.03
SKA3-204ENST00000462482 HEY1Q9Y5J3 304 aa15.21■□□□□ 0.03
SKA3-204ENST00000462482 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.21■□□□□ 0.03
SKA3-204ENST00000462482 ANKRD36A6QL64 1941 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 LRRD1A4D1F6 860 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 LILRA5A6NI73 299 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 PDZK1P1A8MUH7 402 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 SLC4A1P02730 911 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 PRKAR1AP10644 381 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 ZFXP17010 805 aaPredicted RBP15.2■□□□□ 0.02
SKA3-204ENST00000462482 AMD1P17707 334 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 PBX1P40424 430 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 TNNT3P45378 269 aaPredicted RBP15.2■□□□□ 0.02
SKA3-204ENST00000462482 CLCNKAP51800 687 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 IFI35P80217 286 aaPredicted RBP15.2■□□□□ 0.02
SKA3-204ENST00000462482 FOXM1Q08050 763 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 PPIDQ08752 370 aaKnown RBP15.2■□□□□ 0.02
SKA3-204ENST00000462482 AP1B1Q10567 949 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 GALNT3Q14435 633 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 PDK1Q15118 436 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 PDPK2PQ6A1A2 396 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 LUZP1Q86V48 1076 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 PTRH1Q86Y79 214 aaKnown RBP15.2■□□□□ 0.02
SKA3-204ENST00000462482 ESX1Q8N693 406 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 PQLC3Q8N755 202 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 LRRN4Q8WUT4 740 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 RNF157Q96PX1 679 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 WDR24Q96S15 920 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 SRPK1Q96SB4 655 aaKnown RBP15.2■□□□□ 0.02
SKA3-204ENST00000462482 TBC1D10AQ9BXI6 508 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 TRIM39Q9HCM9 518 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 PRDM8Q9NQV8 689 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 ATXN10Q9UBB4 475 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 LRRK1Q38SD2 2015 aa15.2■□□□□ 0.02
SKA3-204ENST00000462482 TENM4Q6N022 2769 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 A6NCN8 305 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 APOL1O14791 398 aa15.19■□□□□ 0.02
SKA3-204ENST00000462482 PPP1R12AO14974 1030 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms