RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 HERPUD2Q9BSE4 406 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 PACSIN1Q9BY11 444 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 SPRY4Q9C004 299 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 STN1Q9H668 368 aaKnown RBP15.93■□□□□ 0.14
COL7A1-204ENST00000462475 APMAPQ9HDC9 416 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 ARFGAP3Q9NP61 516 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 HAUS2Q9NVX0 235 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 PKD2L2Q9NZM6 624 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 KLHL3Q9UH77 587 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 ANKRD66B4E2M5 251 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 ARHGAP6O43182 974 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 F3P13726 295 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 POLE2P56282 527 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 UBASH3AP57075 661 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 MC2RQ01718 297 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 GALNT3Q14435 633 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 ZNF648Q5T619 568 aaPredicted RBP15.92■□□□□ 0.14
COL7A1-204ENST00000462475 SLC9B2Q86UD5 537 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 MAP7D3Q8IWC1 876 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 RAPGEF5Q92565 580 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 TEFMQ96QE5 360 aaKnown RBP15.92■□□□□ 0.14
COL7A1-204ENST00000462475 MLPHQ9BV36 600 aaPredicted RBP15.92■□□□□ 0.14
COL7A1-204ENST00000462475 TBC1D10AQ9BXI6 508 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 CEP41Q9BYV8 373 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 BRD8Q9H0E9 1235 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 ADNPQ9H2P0 1102 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 RMI1Q9H9A7 625 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 ATXN10Q9UBB4 475 aa15.92■□□□□ 0.14
COL7A1-204ENST00000462475 LUC7L2Q9Y383 392 aaKnown RBP15.92■□□□□ 0.14
COL7A1-204ENST00000462475 COL12A1Q99715 3063 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 LOC101059948A0A1B0GTJ6 334 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 RGSL1A5PLK6 1076 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 ZNF891A8MT65 544 aaPredicted RBP15.91■□□□□ 0.14
COL7A1-204ENST00000462475 GRID2O43424 1007 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 NUAK1O60285 661 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 SLC4A1P02730 911 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 KRT7P08729 469 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 ZNF8P17098 575 aaPredicted RBP15.91■□□□□ 0.14
COL7A1-204ENST00000462475 EPHA4P54764 986 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 UBE2IP63279 158 aaKnown RBP15.91■□□□□ 0.14
COL7A1-204ENST00000462475 IFI35P80217 286 aaPredicted RBP15.91■□□□□ 0.14
COL7A1-204ENST00000462475 PPIDQ08752 370 aaKnown RBP15.91■□□□□ 0.14
COL7A1-204ENST00000462475 KCNAB2Q13303 367 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 ALS2CLQ60I27 953 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 TIPARPQ7Z3E1 657 aaKnown RBP15.91■□□□□ 0.14
COL7A1-204ENST00000462475 PHYKPLQ8IUZ5 450 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 UNC5BQ8IZJ1 945 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 NLGN4XQ8N0W4 816 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 PLD5Q8N7P1 536 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 NLGN4YQ8NFZ3 816 aaPredicted RBP15.91■□□□□ 0.14
COL7A1-204ENST00000462475 CCHCR1Q8TD31 782 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 SH3KBP1Q96B97 665 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 SLC45A3Q96JT2 553 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 TRIB3Q96RU7 358 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 CARD9Q9H257 536 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 PRDM8Q9NQV8 689 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 UVRAGQ9P2Y5 699 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 CPNE7Q9UBL6 633 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 ADGRG1Q9Y653 693 aa15.91■□□□□ 0.14
COL7A1-204ENST00000462475 ZFC3H1O60293 1989 aaKnown RBP15.91■□□□□ 0.14
COL7A1-204ENST00000462475 KIR2DS5A0A0G2JLQ3 304 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 A0A0G2JNG1 304 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 SYCE3A1L190 88 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 KIR2DS3K7RE56 304 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 NKX2-8O15522 239 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 STK17BO94768 372 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 PIRTP0C851 137 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 PRKAR1AP10644 381 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 SLC2A4P14672 509 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 KDELR1P24390 212 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 GFERP55789 205 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 TPM4P67936 248 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 KIR2DS5Q14953 304 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 PLA2G4EQ3MJ16 856 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 ZNF569Q5MCW4 686 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 ZFYVE27Q5T4F4 411 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 CRTC3Q6UUV7 619 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 CEACAM20Q6UY09 585 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 PTRH1Q86Y79 214 aaKnown RBP15.9■□□□□ 0.14
COL7A1-204ENST00000462475 GPR26Q8NDV2 337 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 IQCDQ96DY2 449 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 ZNF830Q96NB3 372 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-204ENST00000462475 RNF157Q96PX1 679 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 PLEKHG4BQ96PX9 1271 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 SPATA16Q9BXB7 569 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 ADGRE3Q9BY15 652 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-204ENST00000462475 OR2AG1Q9H205 316 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 OSGEPL1Q9H4B0 414 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 GPN2Q9H9Y4 310 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-204ENST00000462475 FBXO8Q9NRD0 319 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 KLC4Q9NSK0 619 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 SIDT1Q9NXL6 827 aaKnown RBP15.9■□□□□ 0.14
COL7A1-204ENST00000462475 SCHIP1Q9P0W5 487 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-204ENST00000462475 SHOC2Q9UQ13 582 aa15.9■□□□□ 0.14
COL7A1-204ENST00000462475 MN1Q10571 1320 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-204ENST00000462475 RELNP78509 3460 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 LILRA5A6NI73 299 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 H2AFZP0C0S5 128 aa15.89■□□□□ 0.13
COL7A1-204ENST00000462475 MAP4P27816 1152 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms