RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 NEK11Q8NG66 645 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 ENOX1Q8TC92 643 aaKnown RBP10.73□□□□□ -0.69
CBX3-205ENST00000462165 CPT1CQ8TCG5 803 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 NSMCE1Q8WV22 266 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 STAMBPL1Q96FJ0 436 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 SMIM14Q96QK8 99 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 RIOK2Q9BVS4 552 aaKnown RBP10.73□□□□□ -0.69
CBX3-205ENST00000462165 ZNF768Q9H5H4 540 aaKnown RBP10.73□□□□□ -0.69
CBX3-205ENST00000462165 UCK1Q9HA47 277 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 ETNK2Q9NVF9 386 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 TAS2R14Q9NYV8 317 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 CPNE7Q9UBL6 633 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 DNPEPQ9ULA0 475 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 CNOT6Q9ULM6 557 aaKnown RBP10.73□□□□□ -0.69
CBX3-205ENST00000462165 KCNK6Q9Y257 313 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 PRKAB1Q9Y478 270 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 OAS3Q9Y6K5 1087 aaKnown RBP10.73□□□□□ -0.69
CBX3-205ENST00000462165 CENPEQ02224 2701 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 LRBAP50851 2863 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 CDC14CA4D256 554 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 TMEM191CA6NGB0 347 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 TTLL8A6PVC2 850 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 H3BRJ5 948 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 KATNA1O75449 491 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 CREG1O75629 220 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 KIAA0754O94854 1291 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 NDUFA10O95299 355 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 ACP5P13686 325 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 AMPD1P23109 780 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 ARL4AP40617 200 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 UBE2IP63279 158 aaKnown RBP10.72□□□□□ -0.69
CBX3-205ENST00000462165 SEMA5AQ13591 1074 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 IL11RAQ14626 422 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 DPYSL2Q16555 572 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 TMCO3Q6UWJ1 677 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 POLNQ7Z5Q5 900 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 TMEM135Q86UB9 458 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 ATPAF2Q8N5M1 289 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 TEX26Q8N6G2 289 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 PCMTD1Q96MG8 357 aaPredicted RBP10.72□□□□□ -0.69
CBX3-205ENST00000462165 OR6C1Q96RD1 312 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 WDR24Q96S15 920 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 SYT11Q9BT88 431 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 CARD9Q9H257 536 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 NT5MQ9NPB1 228 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 CUEDC1Q9NWM3 386 aaPredicted RBP10.72□□□□□ -0.69
CBX3-205ENST00000462165 OGFRQ9NZT2 677 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 CREBBPQ92793 2442 aa10.72□□□□□ -0.69
CBX3-205ENST00000462165 ENO4A6NNW6 628 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 FADS2P1A8MWK0 482 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 NUAK1O60285 661 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 SNX2O60749 519 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 SPAG6O75602 509 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 UBXN7O94888 489 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 CLDN7O95471 211 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 MT-ND3P03897 115 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 CCDC172P0C7W6 258 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 CCNYL3P0C7X3 344 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 FGF5P12034 268 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 FERP16591 822 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 XRCC1P18887 633 aaPredicted RBP10.71□□□□□ -0.69
CBX3-205ENST00000462165 GARSP41250 739 aaKnown RBP10.71□□□□□ -0.69
CBX3-205ENST00000462165 EPHB1P54762 984 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 SH3BP2P78314 561 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 DNASE1L3Q13609 305 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 HENMT1Q5T8I9 393 aaKnown RBP10.71□□□□□ -0.69
CBX3-205ENST00000462165 ALG1LQ6GMV1 187 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 TMEM26Q6ZUK4 368 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 PHYKPLQ8IUZ5 450 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 RASGRP3Q8IV61 690 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 RNF31Q96EP0 1072 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 PLEKHG4BQ96PX9 1271 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 LYSMD1Q96S90 227 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 TRIM55Q9BYV6 548 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 TRIM7Q9C029 511 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 TWSG1Q9GZX9 223 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 LHX9Q9NQ69 397 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 MED13Q9UHV7 2174 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 PADI1Q9ULC6 663 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 MAP4K5Q9Y4K4 846 aa10.71□□□□□ -0.69
CBX3-205ENST00000462165 PIPSLA2A3N6 862 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 LGALS16A8MUM7 142 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 TMCO5BA8MYB1 307 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 C21orf140B9A014 251 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 GRID2O43424 1007 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 SEMA7AO75326 666 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 DNAJB5O75953 348 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 PRLP01236 227 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 RNF224P0DH78 156 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 TYRP1P17643 537 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 AMD1P17707 334 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 IL1R2P27930 398 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 SERPINB6P35237 376 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 PCK1P35558 622 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 SPINT3P49223 89 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 SEPHS1P49903 392 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 IHHQ14623 411 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 SMTNL2Q2TAL5 461 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.7□□□□□ -0.7
CBX3-205ENST00000462165 BOLA3Q53S33 107 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms