RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CFHR1Q03591 330 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 WASHC5Q12768 1159 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 C16orf72Q14CZ0 275 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 AMZ1Q400G9 498 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 ODF2Q5BJF6 829 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 ARHGAP40Q5TG30 622 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 TMEM71Q6P5X7 295 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 IYDQ6PHW0 289 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 SPOCD1Q6ZMY3 1216 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 MARK2Q7KZI7 788 aaKnown RBP9.07□□□□□ -0.96
BRCA1-207ENST00000461798 LYSMD3Q7Z3D4 306 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 DTX1Q86Y01 620 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 CCDC170Q8IYT3 715 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 KATNAL2Q8IYT4 538 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 RCOR2Q8IZ40 523 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 TRAM1L1Q8N609 369 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 SLC37A2Q8TED4 501 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 TTC9Q92623 222 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 AGAP3Q96P47 875 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 CCNL2Q96S94 520 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-207ENST00000461798 NUDT22Q9BRQ3 303 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 ZSCAN5AQ9BUG6 496 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 SUDS3Q9H7L9 328 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-207ENST00000461798 RDH14Q9HBH5 336 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 SARS2Q9NP81 518 aaKnown RBP9.07□□□□□ -0.96
BRCA1-207ENST00000461798 AKAP7Q9P0M2 348 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-207ENST00000461798 PISDQ9UG56 409 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 ZNHIT2Q9UHR6 403 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 HYOU1Q9Y4L1 999 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 ADGRG1Q9Y653 693 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 BPTFQ12830 3046 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 PRR19A6NJB7 356 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 C9orf172C9J069 976 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 CHUKO15111 745 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 GRID2O43424 1007 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 CST8O60676 142 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 C1QL1O75973 258 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 ZRANB2O95218 330 aaKnown RBP eCLIP9.06□□□□□ -0.96
BRCA1-207ENST00000461798 EML2O95834 649 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 LIPCP11150 499 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 SLC2A4P14672 509 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 ITIH1P19827 911 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 CD68P34810 354 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-207ENST00000461798 ETV5P41161 510 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 NOP2P46087 812 aaKnown RBP9.06□□□□□ -0.96
BRCA1-207ENST00000461798 ADCY2Q08462 1091 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 C19orf57Q0VDD7 668 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 BIRC2Q13490 618 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 GALNT3Q14435 633 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 MAP9Q49MG5 647 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 TFDP3Q5H9I0 405 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 PHF19Q5T6S3 580 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 TMEM164Q5U3C3 297 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 CCDC70Q6NSX1 233 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 KDELC1Q6UW63 502 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 CCDC81Q6ZN84 652 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 LAPTM4BQ86VI4 370 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 JAMLQ86YT9 394 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 GPR26Q8NDV2 337 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 SPATA22Q8NHS9 363 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 TFB1MQ8WVM0 346 aaKnown RBP9.06□□□□□ -0.96
BRCA1-207ENST00000461798 USP7Q93009 1102 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 SH3KBP1Q96B97 665 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 CALR3Q96L12 384 aaKnown RBP9.06□□□□□ -0.96
BRCA1-207ENST00000461798 FCRL5Q96RD9 977 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 VAT1Q99536 393 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 HERPUD2Q9BSE4 406 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 CEP41Q9BYV8 373 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 TRIM5Q9C035 493 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 TRABDQ9H4I3 376 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 KCNK4Q9NYG8 393 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 ATXN10Q9UBB4 475 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 SAE1Q9UBE0 346 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-207ENST00000461798 TBC1D29Q9UFV1 150 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 ZNF711Q9Y462 761 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 PCDHA13Q9Y5I0 950 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 SHROOM3Q8TF72 1996 aa9.06□□□□□ -0.96
BRCA1-207ENST00000461798 hCG_1818297A0A087WSY0 165 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 KIR2DS5A0A0G2JLQ3 304 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 PRAMEF33A0A0G2JMD5 474 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 A0A0G2JNG1 304 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 HACD1B0YJ81 288 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 B4E171 279 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 KIR2DS3K7RE56 304 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 VEGFDO43915 354 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 PRAMEF10O60809 474 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 SLC25A14O95258 325 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-207ENST00000461798 MT-CYBP00156 380 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-207ENST00000461798 THRAP10827 490 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 FGF3P11487 239 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-207ENST00000461798 CCL4P13236 92 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 F3P13726 295 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 PECAM1P16284 738 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-207ENST00000461798 ZNF8P17098 575 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-207ENST00000461798 BPIP17213 487 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 FECHP22830 423 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 HMGCLP35914 325 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 TSPAN7P41732 249 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 EPHA4P54764 986 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 DYNLT1P63172 113 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms