RNA–Protein interactions for RNA: ENST00000461488.5

SMIM7-204, Transcript of small integral membrane protein 7, human

TSL 3

Gene SMIM7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM7-204	ENST00000461488	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.1	□□□□□ -0.79
SMIM7-204	ENST00000461488	SNX24	Q9Y343	169 aa		10.1	□□□□□ -0.79
SMIM7-204	ENST00000461488	KCTD3	Q9Y597	815 aa		10.1	□□□□□ -0.79
SMIM7-204	ENST00000461488	DGKB	Q9Y6T7	804 aa		10.1	□□□□□ -0.79
SMIM7-204	ENST00000461488	PCNX2	A6NKB5	2137 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	TRBV5-4	A0A0C4DH59	114 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	TMEM202	A6NGA9	273 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	CDX4	O14627	284 aa	Predicted RBP	10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	INPP4B	O15327	924 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	EIF3H	O15372	352 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	PCDHGA12	O60330	932 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	TNF	P01375	233 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	RALB	P11234	206 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	JUND	P17535	347 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	SDHB	P21912	280 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	PPARG	P37231	505 aa	Predicted RBP	10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	HK3	P52790	923 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	SRP54	P61011	504 aa	Known RBP	10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	TMPRSS15	P98073	1019 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	EIF2B5	Q13144	721 aa	Known RBP	10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	CBLB	Q13191	982 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	NFATC2	Q13469	925 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	GTF2H3	Q13889	308 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	KCTD19	Q17RG1	926 aa	Predicted RBP	10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	ALG11	Q2TAA5	492 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	TPRG1L	Q5T0D9	272 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	LYPLAL1	Q5VWZ2	237 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	KDM7A	Q6ZMT4	941 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	HID1	Q8IV36	788 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	KIAA2013	Q8IYS2	634 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	NOA1	Q8NC60	698 aa	Known RBP	10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	OR13J1	Q8NGT2	312 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	GDAP1	Q8TB36	358 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	SEC14L1	Q92503	715 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	STAMBPL1	Q96FJ0	436 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	SCARF2	Q96GP6	870 aa	Predicted RBP	10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	LGR4	Q9BXB1	951 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	TRIM39	Q9HCM9	518 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	FGF22	Q9HCT0	170 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	FSCN3	Q9NQT6	498 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	CHRAC1	Q9NRG0	131 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	TREX1	Q9NSU2	369 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	SPAST	Q9UBP0	616 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	APOBEC3B	Q9UH17	382 aa	Known RBP	10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	CNOT6	Q9ULM6	557 aa	Known RBP	10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	CSNK1G3	Q9Y6M4	447 aa		10.09	□□□□□ -0.79
SMIM7-204	ENST00000461488	CCDC78	A2IDD5	438 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	NEMP2	A6NFY4	417 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	CFAP99	D6REC4	459 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488		E7ESA3	106 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	FLRT2	O43155	660 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	AVIL	O75366	819 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	PIAS2	O75928	621 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	USP1	O94782	785 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	TTC4	O95801	387 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	CEACAM5	P06731	702 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	POLB	P06746	335 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	CTSE	P14091	401 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	PGAM1	P18669	254 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	FOXN2	P32314	431 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	TUBB4B	P68371	445 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	CRADD	P78560	199 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	MRPS25	P82663	173 aa	Known RBP	10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	DHX9	Q08211	1270 aa	Known RBP	10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	ITIH4	Q14624	930 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	ELOC	Q15369	112 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	BBS9	Q3SYG4	887 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	FASTKD1	Q53R41	847 aa	Known RBP	10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	ZRANB3	Q5FWF4	1079 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	AARS2	Q5JTZ9	985 aa	Known RBP	10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	GPRC6A	Q5T6X5	926 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	STPG1	Q5TH74	334 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	DOK6	Q6PKX4	331 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	CERS6	Q6ZMG9	384 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	CEP128	Q6ZU80	1094 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	CENPU	Q71F23	418 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	TMEM135	Q86UB9	458 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	TRIM74	Q86UV6	250 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	LMNTD2	Q8IXW0	634 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	NXPE1	Q8N323	547 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	MPP5	Q8N3R9	675 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	OR6P1	Q8NGX9	317 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	OR4L1	Q8NH43	312 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	GABPB2	Q8TAK5	448 aa	Predicted RBP	10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	SCG3	Q8WXD2	468 aa	Known RBP	10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	OR1E3	Q8WZA6	343 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	ART4	Q93070	314 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	HDAC10	Q969S8	669 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	TSACC	Q96A04	125 aa	Predicted RBP	10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	ZNF669	Q96BR6	464 aa	Predicted RBP	10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	PDXP	Q96GD0	296 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	ZNF514	Q96K75	400 aa	Predicted RBP	10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	ZNF778	Q96MU6	729 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	TTC25	Q96NG3	672 aa		10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	EBNA1BP2	Q99848	306 aa	Known RBP	10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	CARS2	Q9HA77	564 aa	Known RBP	10.08	□□□□□ -0.8
SMIM7-204	ENST00000461488	CYP4F12	Q9HCS2	524 aa		10.08	□□□□□ -0.8

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