RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ETNK1Q9HBU6 452 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 THSD1Q9NS62 852 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PKP3Q9Y446 797 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PCDHB1Q9Y5F3 818 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SAR1BQ9Y6B6 198 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CFAP47Q6ZTR5 3102 aa13.15□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ACACAQ13085 2346 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 WDFY3Q8IZQ1 3526 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 STX7O15400 261 aaKnown RBP13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SLC4A1P02730 911 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 MPOP05164 745 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 LPOP22079 712 aaPredicted RBP13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 RPL22P35268 128 aaKnown RBP13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PAFAH1B1P43034 410 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 KCNJ1P48048 391 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CDK3Q00526 305 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 LAMB3Q13751 1172 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TCEA2Q15560 299 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PDPK2PQ6A1A2 396 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ARL14Q8N4G2 192 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 FAM46DQ8NEK8 389 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GRK7Q8WTQ7 553 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 EID2BQ96D98 161 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CCDC97Q96F63 343 aaPredicted RBP13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PLEKHG4BQ96PX9 1271 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 WDR24Q96S15 920 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 APOL2Q9BQE5 337 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ZSCAN5AQ9BUG6 496 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 AP1M1Q9BXS5 423 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 STRADBQ9C0K7 418 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CYP4F12Q9HCS2 524 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 RAB6BQ9NRW1 208 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 NFKBIL1Q9UBC1 381 aaPredicted RBP13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 RNF14Q9UBS8 474 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PNMA8BQ9ULN7 279 aaPredicted RBP13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SPO11Q9Y5K1 396 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 FAM208BQ5VWN6 2430 aa13.14□□□□□ -0.31
RAB11FIP3-207ENST00000461009 AP3B1O00203 1094 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ZNF185O15231 689 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TLX3O43711 291 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 DXOO77932 396 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ETS1P14921 441 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CASQ1P31415 396 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 COILP38432 576 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CDH17Q12864 832 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 BIRC2Q13490 618 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SPARCL1Q14515 664 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CYP1B1Q16678 543 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PERM1Q5SV97 790 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 HENMT1Q5T8I9 393 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CCDC137Q6PK04 289 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PPP1R21Q6ZMI0 780 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PELI3Q8N2H9 469 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TTC30BQ8N4P2 665 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TAB3Q8N5C8 712 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TRAM1L1Q8N609 369 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 DNAAF3Q8N9W5 541 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GPR26Q8NDV2 337 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 WDR36Q8NI36 951 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 DTX3LQ8TDB6 740 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TRIM44Q96DX7 344 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GFM1Q96RP9 751 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 C19orf43Q9BQ61 176 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 LGR4Q9BXB1 951 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GSDMCQ9BYG8 508 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 DPEP2Q9H4A9 486 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 BPIFA1Q9NP55 256 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 IL17CQ9P0M4 197 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SATB2Q9UPW6 733 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 FREM2Q5SZK8 3169 aa13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ANKRD11Q6UB99 2663 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PRSS38A1L453 326 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TMEM202A6NGA9 273 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 AURKAO14965 403 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 INPP4BO15327 924 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PHF2O75151 1096 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ASMTLO95671 621 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 KRT14P02533 472 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CELA2BP08218 269 aaPredicted RBP13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ZSCAN5DPP0CG00 497 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GLB1P16278 677 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 BPIP17213 487 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SPAM1P38567 509 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 HADHAP40939 763 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 MLLT3P42568 568 aaPredicted RBP13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 FNTAP49354 379 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 UCNP55089 124 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CDK16Q00536 496 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ILF3Q12906 894 aaKnown RBP eCLIP13.12□□□□□ -0.316e-8■■■■■ 27.3
RAB11FIP3-207ENST00000461009 SEMA5AQ13591 1074 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 C3orf38Q5JPI3 329 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ALS2CLQ60I27 953 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 DENND5AQ6IQ26 1287 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 FOXR1Q6PIV2 292 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 KYQ8NBH2 561 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 OR1E3Q8WZA6 343 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CCDC74AQ96AQ1 378 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PDXPQ96GD0 296 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ATXN7L3BQ96GX2 97 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TMEM74Q96NL1 305 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms