RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 PCGF1Q9BSM1 259 aa2.43□□□□□ -2.02
SYPL1-203ENST00000460770 LRMDAQ9H2I8 198 aa2.43□□□□□ -2.02
SYPL1-203ENST00000460770 RANBP17Q9H2T7 1088 aaKnown RBP2.43□□□□□ -2.02
SYPL1-203ENST00000460770 ECHDC1Q9NTX5 307 aa2.43□□□□□ -2.02
SYPL1-203ENST00000460770 ACSS1Q9NUB1 689 aaPredicted RBP2.43□□□□□ -2.02
SYPL1-203ENST00000460770 MPP6Q9NZW5 540 aa2.43□□□□□ -2.02
SYPL1-203ENST00000460770 PAK5Q9P286 719 aa2.43□□□□□ -2.02
SYPL1-203ENST00000460770 ACAD8Q9UKU7 415 aa2.43□□□□□ -2.02
SYPL1-203ENST00000460770 CEPT1Q9Y6K0 416 aa2.43□□□□□ -2.02
SYPL1-203ENST00000460770 OR5K3A6NET4 321 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 KCNN4O15554 427 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 FTCDO95954 541 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 TYMPP19971 482 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 MCCP23508 829 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 CDAP32320 146 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 ELF1P32519 619 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 UBA7P41226 1012 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 OS9Q13438 667 aaPredicted RBP2.42□□□□□ -2.02
SYPL1-203ENST00000460770 CAMK1Q14012 370 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 UBE4AQ14139 1066 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 DRAP1Q14919 205 aaPredicted RBP2.42□□□□□ -2.02
SYPL1-203ENST00000460770 TAF5Q15542 800 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 KIAA1644Q3SXP7 199 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 TUBB8Q3ZCM7 444 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 PACS1Q6VY07 963 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 BBS12Q6ZW61 710 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 ADSSL1Q8N142 457 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 OR5R1Q8NH85 324 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 ZNF473Q8WTR7 871 aaKnown RBP2.42□□□□□ -2.02
SYPL1-203ENST00000460770 PHF21AQ96BD5 680 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 ELP4Q96EB1 424 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 GRAMD2BQ96HH9 432 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 ZSCAN31Q96LW9 406 aaPredicted RBP2.42□□□□□ -2.02
SYPL1-203ENST00000460770 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 USP44Q9H0E7 712 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 HSPB7Q9UBY9 170 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 MRPS28Q9Y2Q9 187 aaKnown RBP2.42□□□□□ -2.02
SYPL1-203ENST00000460770 SCINQ9Y6U3 715 aa2.42□□□□□ -2.02
SYPL1-203ENST00000460770 A6NL46 340 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 DUXAA6NLW8 204 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 KRTAP16-1A8MUX0 517 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 PRR32B1ATL7 298 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 VCYO14598 125 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 ZNF821O75541 412 aaPredicted RBP2.41□□□□□ -2.02
SYPL1-203ENST00000460770 EML2O95834 649 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 TRIM49P0CI25 452 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 TRIM49CP0CI26 452 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 IGHV4-38-2P0DP08 117 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 UBA1P22314 1058 aaKnown RBP2.41□□□□□ -2.02
SYPL1-203ENST00000460770 MAP2K2P36507 400 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 BMXP51813 675 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 UFM1P61960 85 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 COG7P83436 770 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 TMEM187Q14656 261 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 ZNF239Q16600 458 aaKnown RBP2.41□□□□□ -2.02
SYPL1-203ENST00000460770 ALS2CLQ60I27 953 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 C18orf63Q68DL7 685 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 SH2D5Q6ZV89 423 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 BEST3Q8N1M1 668 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 BMPERQ8N8U9 685 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 MRGPRDQ8TDS7 321 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 FCAMRQ8WWV6 532 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 APBB2Q92870 758 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 KLHL29Q96CT2 875 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 MOCOSQ96EN8 888 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 PHF7Q9BWX1 381 aaPredicted RBP2.41□□□□□ -2.02
SYPL1-203ENST00000460770 PRKRIP1Q9H875 184 aaPredicted RBP2.41□□□□□ -2.02
SYPL1-203ENST00000460770 UBA2Q9UBT2 640 aaPredicted RBP2.41□□□□□ -2.02
SYPL1-203ENST00000460770 TAGLN3Q9UI15 199 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 RASAL2Q9UJF2 1139 aa2.41□□□□□ -2.02
SYPL1-203ENST00000460770 ANKRD28O15084 1053 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 SORBS2O94875 1100 aaKnown RBP2.4□□□□□ -2.03
SYPL1-203ENST00000460770 CLPTM1O96005 669 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 ITGA3P26006 1051 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 CCR10P46092 362 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 RHBDL3P58872 404 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 RPP30P78346 268 aaKnown RBP2.4□□□□□ -2.03
SYPL1-203ENST00000460770 DCTN2Q13561 401 aaKnown RBP2.4□□□□□ -2.03
SYPL1-203ENST00000460770 GSTA3Q16772 222 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 ZNF280DQ6N043 979 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 PAPD4Q6PIY7 484 aaKnown RBP2.4□□□□□ -2.03
SYPL1-203ENST00000460770 QSOX2Q6ZRP7 698 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 PIWIL4Q7Z3Z4 852 aaKnown RBP2.4□□□□□ -2.03
SYPL1-203ENST00000460770 PAF1Q8N7H5 531 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 ACVR1CQ8NER5 493 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 KIF1BPQ96EK5 621 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 AGAP3Q96P47 875 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 ACOX2Q99424 681 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 PCYT2Q99447 389 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 MPHOSPH6Q99547 160 aaKnown RBP2.4□□□□□ -2.03
SYPL1-203ENST00000460770 VGLL1Q99990 258 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 HEMGNQ9BXL5 484 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 LTB4R2Q9NPC1 389 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 CCDC177Q9NQR7 707 aaPredicted RBP2.4□□□□□ -2.03
SYPL1-203ENST00000460770 SLC25A10Q9UBX3 287 aaPredicted RBP2.4□□□□□ -2.03
SYPL1-203ENST00000460770 KCNJ14Q9UNX9 436 aa2.4□□□□□ -2.03
SYPL1-203ENST00000460770 EXOGQ9Y2C4 368 aaKnown RBP2.4□□□□□ -2.03
SYPL1-203ENST00000460770 COL5A2P05997 1499 aaPredicted RBP2.39□□□□□ -2.03
SYPL1-203ENST00000460770 A0A0G2JNG1 304 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms