RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 BEST1O76090 585 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 NDUFB4O95168 129 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 SNX4O95219 450 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 CCNDBP1O95273 360 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 NTN1O95631 604 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 CYC1P08574 325 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 CSH1P0DML2 217 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 CSH2P0DML3 217 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 LAMP2P13473 410 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 IL7RP16871 459 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 NFKBIAP25963 317 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 EEF1DP29692 281 aaKnown RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 RPL3P39023 403 aaKnown RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 MLH1P40692 756 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 AMTP48728 403 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 NLRP5P59047 1200 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 MC1RQ01726 317 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 KLHL30Q0D2K2 578 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 MAMLD1Q13495 774 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 OLIG2Q13516 323 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 ACVR2BQ13705 512 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 DRAP1Q14919 205 aaPredicted RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 ZNF674Q2M3X9 581 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 DPCR1Q3MIW9 517 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 CXorf66Q5JRM2 361 aaPredicted RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 TYW3Q6IPR3 259 aaKnown RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 TTI2Q6NXR4 508 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 KLHL24Q6TFL4 600 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 OLFM4Q6UX06 510 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 CCBE1Q6UXH8 406 aaPredicted RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 MTSS1LQ765P7 747 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 RUFY3Q7L099 469 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 SLFN11Q7Z7L1 901 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 THNSL1Q8IYQ7 743 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 ADSSL1Q8N142 457 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 SRBD1Q8N5C6 995 aaKnown RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 FRMD1Q8N878 549 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 SCCPDHQ8NBX0 429 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 AGBL3Q8NEM8 1001 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 OR14A16Q8NHC5 309 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 B4GALNT2Q8NHY0 566 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 USP6NLQ92738 828 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 EXOC4Q96A65 974 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 FAM149B1Q96BN6 582 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 TXNDC15Q96J42 360 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 VPS39Q96JC1 886 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 SLC41A2Q96JW4 573 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 GBP5Q96PP8 586 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 SLITRK1Q96PX8 696 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 GSDMAQ96QA5 445 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 C1QTNF5Q9BXJ0 243 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 TEX13BQ9BXU2 312 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 MUC13Q9H3R2 512 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 ESRP2Q9H6T0 727 aaKnown RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 FBRSL1Q9HCM7 1045 aaKnown RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 MKKSQ9NPJ1 570 aaPredicted RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 RBM28Q9NW13 759 aaKnown RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 ZNHIT6Q9NWK9 470 aaKnown RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 UTP6Q9NYH9 597 aaKnown RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 ZNF624Q9P2J8 865 aaPredicted RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 CNOT8Q9UFF9 292 aaKnown RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 CHORDC1Q9UHD1 332 aaPredicted RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 CORO1CQ9ULV4 474 aaPredicted RBP3.39□□□□□ -1.87
VPS8-215ENST00000460158 HPCAL4Q9UM19 191 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 PCDHA7Q9UN72 937 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 ADAM18Q9Y3Q7 739 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 CEPT1Q9Y6K0 416 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 STON1Q9Y6Q2 735 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 AP1M2Q9Y6Q5 423 aa3.39□□□□□ -1.87
VPS8-215ENST00000460158 KRT87PA6NCN2 255 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 LIPT2A6NK58 231 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 PTGES3LE9PB15 166 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 CAPN9O14815 690 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 ZIC3O60481 467 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 KERAO60938 352 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 ERAL1O75616 437 aaKnown RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 SLC22A3O75751 556 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 NKX2-2O95096 273 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 APBB3O95704 486 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 MLYCDO95822 493 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 ALPLP05186 524 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 EIF2S1P05198 315 aaKnown RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 HOXC6P09630 235 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 NR2F1P10589 423 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 G6PDP11413 515 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 SFTPCP11686 197 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 RARGP13631 454 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 GPTP24298 496 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 ITGB8P26012 769 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 TMOD1P28289 359 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 EIF2S3P41091 472 aaKnown RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 F2RL1P55085 397 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 CRYZQ08257 329 aaKnown RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 AIMP1Q12904 312 aaKnown RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 CSTF3Q12996 717 aaKnown RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 STK4Q13043 487 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 COASYQ13057 564 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 TRAF3Q13114 568 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 NAE1Q13564 534 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 NEDD9Q14511 834 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms