RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 TTC34A8MYJ7 566 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 FOXO6A8MYZ6 492 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 H3BMM5 538 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 KAT7O95251 611 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 DHRS4L1P0CG22 281 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 CTPS1P17812 591 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 VIPR1P32241 457 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 FOXN2P32314 431 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 SLC8A1P32418 973 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 GJA4P35212 333 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 PTGER3P43115 390 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 SERPINB4P48594 390 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 PRKAA2P54646 552 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 WDR4P57081 412 aaKnown RBP8.9□□□□□ -0.98
VPS50-207ENST00000458530 CCDC15Q0P6D6 951 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 ELP6Q0PNE2 266 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 ITGA9Q13797 1035 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 PDE1CQ14123 709 aaPredicted RBP8.9□□□□□ -0.98
VPS50-207ENST00000458530 LAPTM4AQ15012 233 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 ZKSCAN8Q15776 578 aaPredicted RBP8.9□□□□□ -0.98
VPS50-207ENST00000458530 FAM83EQ2M2I3 478 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 HNRNPA1L2Q32P51 320 aaKnown RBP8.9□□□□□ -0.98
VPS50-207ENST00000458530 GPR33Q49SQ1 333 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 SLC44A4Q53GD3 710 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 ZRANB3Q5FWF4 1079 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 PPM1JQ5JR12 505 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 GKAP1Q5VSY0 366 aaPredicted RBP8.9□□□□□ -0.98
VPS50-207ENST00000458530 AGAP9Q5VTM2 703 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 TMEM215Q68D42 235 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 UGT3A1Q6NUS8 523 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 SERPINA13PQ6UXR4 307 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 MICALCLQ6ZW33 695 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 ANKS4BQ8N8V4 417 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 TMIEQ8NEW7 156 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 PPP1R14CQ8TAE6 165 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 GRIN3AQ8TCU5 1115 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 ULK4Q96C45 1275 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 MSANTD3Q96H12 275 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 NSMCE3Q96MG7 304 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 KLHL32Q96NJ5 620 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 PLEKHG4BQ96PX9 1271 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 FBRSQ9HAH7 460 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 MLXIPLQ9NP71 852 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 SPATA6Q9NWH7 488 aaPredicted RBP8.9□□□□□ -0.98
VPS50-207ENST00000458530 FKBPLQ9UIM3 349 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 KCTD3Q9Y597 815 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 PCDHB1Q9Y5F3 818 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 WASF2Q9Y6W5 498 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 COL4A2P08572 1712 aa8.9□□□□□ -0.98
VPS50-207ENST00000458530 SPEGQ15772 3267 aa8.9□□□□□ -0.99
VPS50-207ENST00000458530 ASPMQ8IZT6 3477 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 GLYATL1P3A0A0U1RQE8 302 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 UBA6A0AVT1 1052 aaPredicted RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 CCDC189A1A4V9 331 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 RGSL1A5PLK6 1076 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 FAM170BA6NMN3 283 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 TCP11X1B4DZS4 312 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 PSMD11O00231 422 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 TM4SF5O14894 197 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 KLF11O14901 512 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 BUD23O43709 281 aaKnown RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 RNASEH1O60930 286 aaKnown RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 VPS26AO75436 327 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 LEFTY1O75610 366 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 SRP72O76094 671 aaKnown RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 HAUS5O94927 633 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 PRAMEF1O95521 474 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 ESR1P03372 595 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 C2P06681 752 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 ALPIP09923 528 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 TROVE2P10155 538 aaKnown RBP eCLIP8.89□□□□□ -0.99
VPS50-207ENST00000458530 ZNF7P17097 686 aaPredicted RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 SAT1P21673 171 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 ITGB7P26010 798 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 TARSP26639 723 aaKnown RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 ALDH3A1P30838 453 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 HNF1BP35680 557 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 OPRD1P41143 372 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 ETV4P43268 484 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 TNFRSF4P43489 277 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 ADARP55265 1226 aaKnown RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 MPP2Q14168 576 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 ZNF234Q14588 700 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 PTPRNQ16849 979 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 GAB4Q2WGN9 574 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 N4BP2L1Q5TBK1 243 aaPredicted RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 HECTD2Q5U5R9 776 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 FAM46CQ5VWP2 391 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 TAS2R42Q7RTR8 314 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 TRMT11Q7Z4G4 463 aaKnown RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 SNX20Q7Z614 316 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 CMC1Q7Z7K0 106 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 CLEC14AQ86T13 490 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 NUDCD3Q8IVD9 361 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 SLC41A1Q8IVJ1 513 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 CACNA2D3Q8IZS8 1091 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 RBFAQ8N0V3 343 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 PHTF2Q8N3S3 785 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 CHST14Q8NCH0 376 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 ARMC2Q8NEN0 867 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms