RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TSPAN12O95859 305 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 PKMP14618 531 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 TRAF2Q12933 501 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 ANKS6Q68DC2 871 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 PSAPL1Q6NUJ1 521 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 LRRC43Q8N309 656 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 TRPM5Q9NZQ8 1165 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 AFF4Q9UHB7 1163 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 CNOT11Q9UKZ1 510 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 VPS9D1Q9Y2B5 631 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 AP4S1Q9Y587 144 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 PITPNM1O00562 1244 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 STX16O14662 325 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 PYGLP06737 847 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 LBPP18428 481 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 MC4RP32245 332 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 PRMT2P55345 433 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 CTSL3PQ5NE16 218 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 NCEH1Q6PIU2 408 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 C16orf59Q7L2K0 433 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 DDIASQ8IXT1 998 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 MIER2Q8N344 545 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 PCYOX1LQ8NBM8 494 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 FAM81AQ8TBF8 368 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 SLCO4A1Q96BD0 722 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 CYP2S1Q96SQ9 504 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 CLSTN3Q9BQT9 956 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 ADGRE3Q9BY15 652 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 EPB41L1Q9H4G0 881 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 Q9H521 79 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 UBAP1Q9NZ09 502 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 ATXN10Q9UBB4 475 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 NPEPPSL1A6NEC2 478 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 SYCE1LA8MT33 242 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 PDLIM1O00151 329 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 MATN4O95460 622 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 SMIM18P0DKX4 95 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 SLC7A2P52569 658 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 NAA20P61599 178 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 KIF19Q2TAC6 998 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 RIN3Q8TB24 985 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 MPP4Q96JB8 637 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 SEZ6LQ9BYH1 1024 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 SDR39U1Q9NRG7 319 aaPredicted RBP18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 POLG2Q9UHN1 485 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 NDUFAF1Q9Y375 327 aa18.25■□□□□ 0.51
SEMA3B-209ENST00000456560 OR1I1O60431 355 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 VPS4BO75351 444 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 VPS26AO75436 327 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 ABLIM3O94929 683 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 LINC00032P0C843 101 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 TTPAP49638 278 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 CLCN4P51793 760 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 PTPRRQ15256 657 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 GEN1Q17RS7 908 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 DGCR14Q96DF8 476 aaKnown RBP18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 HIC2Q96JB3 615 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 UHRF1Q96T88 793 aaPredicted RBP18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 MUC3BQ9H195 1237 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 SEMA4BQ9NPR2 832 aaPredicted RBP18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 SLC52A3Q9NQ40 469 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 LHX3Q9UBR4 397 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 STOML2Q9UJZ1 356 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 AP4B1Q9Y6B7 739 aa18.24■□□□□ 0.51
SEMA3B-209ENST00000456560 C2orf78A6NCI8 922 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 H7C0S8 307 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 SNAP91O60641 907 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 NIPSNAP2O75323 286 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 TMCC1O94876 653 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 PRR35P0CG20 571 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 IRF1P10914 325 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 ZNF26P17031 533 aaPredicted RBP18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 CAPN3P20807 821 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 RANBP1P43487 201 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 NME5P56597 212 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 OGFOD2Q6N063 350 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 TXNDC11Q6PKC3 985 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 ZNF783Q6ZMS7 281 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 SIDT2Q8NBJ9 832 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 TUBGCP3Q96CW5 907 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 LRCH3Q96II8 777 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 HOPXQ9BPY8 73 aaPredicted RBP18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 SLC39A3Q9BRY0 314 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 NUSAP1Q9BXS6 441 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 HSFX1Q9UBD0 423 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 PCTPQ9UKL6 214 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 BTRCQ9Y297 605 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 BTN3A1O00481 513 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 NR5A2O00482 541 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 STX7O15400 261 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 HGFP14210 728 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 SLC7A1P30825 629 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 RPL5P46777 297 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 HSPA13P48723 471 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 MRPL19P49406 292 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 ALDH7A1P49419 539 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 HK3P52790 923 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 CDKL1Q00532 357 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 FBXO48Q5FWF7 155 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 IRAK1BP1Q5VVH5 260 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms