RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 TCRBV7S3A2A0A539 114 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 APOC3P02656 99 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 DNAJB2P25686 324 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 NDST2P52849 883 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 NRLP54845 237 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 RPS3AP61247 264 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 PMS2P3Q13401 168 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 OCLNQ16625 522 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 USP30Q70CQ3 517 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 LILRB4Q8NHJ6 448 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 SETD4Q9NVD3 440 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 TLL2Q9Y6L7 1015 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 USP31Q70CQ4 1352 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 NUPL2O15504 423 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 CCNDBP1O95273 360 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 FABP3P05413 133 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 IRF1P10914 325 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 IGFN1Q86VF2 1251 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 GHDCQ8N2G8 530 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 ZNF366Q8N895 744 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 VANGL1Q8TAA9 524 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 SLC38A2Q96QD8 506 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 HBEGFQ99075 208 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 ITPAQ9BY32 194 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 ADAM7Q9H2U9 754 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 CHRAC1Q9NRG0 131 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 FETUBQ9UGM5 382 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 NCKAP1Q9Y2A7 1128 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 LRRC14BA6NHZ5 514 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 TRIM3O75382 744 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 CYP11A1P05108 521 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 T-ENOLP0DO92 83 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 NPR2P20594 1047 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 CLCN3P51790 818 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 CSTF1Q05048 431 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 ZNF460Q14592 562 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 GLIS1Q8NBF1 620 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 ATL1Q8WXF7 558 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 P2RY11Q96G91 374 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 OXCT2Q9BYC2 517 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 TBC1D17Q9HA65 648 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 SUCOQ9UBS9 1254 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 PPIEQ9UNP9 301 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 VWA7Q9Y334 891 aa12.28□□□□□ -0.44
NEDD4L-208ENST00000456173 TNFRSF11BO00300 401 aa12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 KCNA5P22460 613 aa12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 PCSK1P29120 753 aa12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 IFNGR2P38484 337 aa12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 NNMTP40261 264 aa12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 LIMK2P53671 638 aa12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 PPP4CP60510 307 aa12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 HAGHLQ6PII5 290 aaPredicted RBP12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 CADM2Q8N3J6 435 aa12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 FSTL5Q8N475 847 aaPredicted RBP12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 MFSD3Q96ES6 412 aa12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 CCDC106Q9BWC9 280 aa12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 IRAK3Q9Y616 596 aa12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 C1orf167Q5SNV9 1468 aa12.27□□□□□ -0.44
NEDD4L-208ENST00000456173 PLOD2O00469 737 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 KLF11O14901 512 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 SNAP29O95721 258 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 ASS1P00966 412 aaKnown RBP12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 GNAO1P09471 354 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 CHRNB1P11230 501 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 OPRL1P41146 370 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 GAD2Q05329 585 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 STARD3Q14849 445 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 OGFRL1Q5TC84 451 aaPredicted RBP12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 SLC9A9Q8IVB4 645 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 ZDHHC21Q8IVQ6 265 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 FBXO27Q8NI29 283 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 C7orf43Q8WVR3 580 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 PMEPA1Q969W9 287 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 OCEL1Q9H607 264 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 KCNMB3Q9NPA1 279 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 BRD7Q9NPI1 651 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 SCUBE2Q9NQ36 999 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 TNPO3Q9Y5L0 923 aaKnown RBP12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 TYROBPO43914 113 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 TNNI3P19429 210 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 NUDT6P53370 316 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 FUT2Q10981 343 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 CPSF6Q16630 551 aaKnown RBP eCLIP12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 STXBP5Q5T5C0 1151 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 SLC25A24Q6NUK1 477 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 SPATA19Q7Z5L4 167 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 ADGRD2Q7Z7M1 963 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 TRPV3Q8NET8 790 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 TMEM203Q969S6 136 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 ITCHQ96J02 903 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 SMIM30A4D0T7 59 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 NARSO43776 548 aaKnown RBP12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 CDC40O60508 579 aaKnown RBP eCLIP12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 FDX1P10109 184 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 RENBPP51606 427 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 GBE1Q04446 702 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 LAPTM5Q13571 262 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 GALNT3Q14435 633 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 BMT2Q1RMZ1 405 aa12.27□□□□□ -0.45
NEDD4L-208ENST00000456173 COQ8AQ8NI60 647 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms