RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RAB6BQ9NRW1 208 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 EVA1BQ9NVM1 165 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 ATXN10Q9UBB4 475 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 ANGPTL2Q9UKU9 493 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 KCTD3Q9Y597 815 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 MROH6A6NGR9 719 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 ZNF185O15231 689 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 VEGFDO43915 354 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 PRAMEF1O95521 474 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 MYF5P13349 255 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 ZNF8P17098 575 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-205ENST00000454542 FNTAP49354 379 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 GNG11P61952 73 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 CTBSQ01459 385 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 ILF3Q12906 894 aaKnown RBP eCLIP14.02□□□□□ -0.17
HDAC4-205ENST00000454542 PEX6Q13608 980 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 TCEA2Q15560 299 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 CHRNA6Q15825 494 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 GUSBP11Q6P575 273 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 DHRS13Q6UX07 377 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 FAM151BQ6UXP7 276 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 ZNF534Q76KX8 674 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 TAF8Q7Z7C8 310 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 CACTIN-AS1Q8N1I8 211 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 CHCHD4Q8N4Q1 142 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 TAB3Q8N5C8 712 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-205ENST00000454542 OR52K1Q8NGK4 314 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 OR13C4Q8NGS5 318 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 GLMNQ92990 594 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 NAT6Q93015 286 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 RANBP9Q96S59 729 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 NAPGQ99747 312 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-205ENST00000454542 SCNM1Q9BWG6 230 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 FKBPLQ9UIM3 349 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 MOSPD1Q9UJG1 213 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 KLK13Q9UKR3 277 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 RIMKLBQ9ULI2 386 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 GPR34Q9UPC5 381 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 ASPMQ8IZT6 3477 aa14.02□□□□□ -0.17
HDAC4-205ENST00000454542 GOLGA4Q13439 2230 aaKnown RBP14.02□□□□□ -0.17
HDAC4-205ENST00000454542 ARHGEF17Q96PE2 2063 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-205ENST00000454542 A6NCN8 305 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 SLC25A14O95258 325 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-205ENST00000454542 TPSB2P20231 275 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 AK4P27144 223 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-205ENST00000454542 COILP38432 576 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-205ENST00000454542 HADHAP40939 763 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 GRIA1P42261 906 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 RPIAP49247 311 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 CLCNKAP51800 687 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 HLTFQ14527 1009 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDAC4-205ENST00000454542 KCNJ11Q14654 390 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 TPSAB1Q15661 275 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 GPRC6AQ5T6X5 926 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 MARK2Q7KZI7 788 aaKnown RBP14.01□□□□□ -0.17
HDAC4-205ENST00000454542 ZNF547Q8IVP9 402 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 IFI44Q8TCB0 444 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 STYXQ8WUJ0 223 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 SCG3Q8WXD2 468 aaKnown RBP14.01□□□□□ -0.17
HDAC4-205ENST00000454542 MAGOHBQ96A72 148 aaKnown RBP14.01□□□□□ -0.17
HDAC4-205ENST00000454542 DNAJC1Q96KC8 554 aaKnown RBP14.01□□□□□ -0.17
HDAC4-205ENST00000454542 AP1M1Q9BXS5 423 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 OR2AG1Q9H205 316 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 NLE1Q9NVX2 485 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-205ENST00000454542 TAAR2Q9P1P5 351 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 APPL1Q9UKG1 709 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 DOLKQ9UPQ8 538 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 PLEKHM1Q9Y4G2 1056 aa14.01□□□□□ -0.17
HDAC4-205ENST00000454542 TRBV5-4A0A0C4DH59 114 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 GOLGA6L10A0A0M3HER8 536 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 GRID2O43424 1007 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 SRP72O76094 671 aaKnown RBP14□□□□□ -0.17
HDAC4-205ENST00000454542 ASMTLO95671 621 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 APRTP07741 180 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 SPINK2P20155 84 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 CDK16Q00536 496 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 INSM1Q01101 510 aaPredicted RBP14□□□□□ -0.17
HDAC4-205ENST00000454542 ACVR1Q04771 509 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 NFATC2Q13469 925 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 POU6F1Q14863 301 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 NR1D2Q14995 579 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 C14orf28Q4W4Y0 310 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 PERM1Q5SV97 790 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 LDLRAP1Q5SW96 308 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 CERCAMQ5T4B2 595 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 ZNF648Q5T619 568 aaPredicted RBP14□□□□□ -0.17
HDAC4-205ENST00000454542 CDCP2Q5VXM1 449 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 CCDC137Q6PK04 289 aaKnown RBP14□□□□□ -0.17
HDAC4-205ENST00000454542 EFL1Q7Z2Z2 1120 aaKnown RBP14□□□□□ -0.17
HDAC4-205ENST00000454542 ZNF438Q7Z4V0 828 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 C11orf96Q7Z7L8 435 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 CREG2Q8IUH2 290 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 SFTPA2Q8IWL1 248 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 GALNT15Q8N3T1 639 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 FAM46DQ8NEK8 389 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 OR6C4Q8NGE1 309 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 GATA6Q92908 595 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 SLCO2A1Q92959 643 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 PEX13Q92968 403 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 TIMM29Q9BSF4 260 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms