RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 UBE2IP63279 158 aaKnown RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MC2RQ01718 297 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MYL5Q02045 173 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SLC25A11Q02978 314 aaKnown RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PTSQ03393 145 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GBE1Q04446 702 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NIPAL4Q0D2K0 466 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MRPL49Q13405 166 aaKnown RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RAPSNQ13702 412 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KRT81Q14533 505 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RFTN1Q14699 578 aaPredicted RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NOMO1Q15155 1222 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ASIC2Q16515 512 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DPYSL2Q16555 572 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TDRD12Q587J7 1177 aaKnown RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NCBP2-AS2Q69YL0 99 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZNF787Q6DD87 383 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 IRGCQ6NXR0 463 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DUS1LQ6P1R4 473 aaKnown RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CEACAM20Q6UY09 585 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ASB18Q6ZVZ8 466 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MICALCLQ6ZW33 695 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LYSMD3Q7Z3D4 306 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ARHGAP22Q7Z5H3 698 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 POLNQ7Z5Q5 900 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PHYKPLQ8IUZ5 450 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GPR150Q8NGU9 434 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ENOX1Q8TC92 643 aaKnown RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 STAMBPL1Q96FJ0 436 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SCRN2Q96FV2 425 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SCARF2Q96GP6 870 aaPredicted RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 COX14Q96I36 57 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CATSPER2Q96P56 530 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 OR6C1Q96RD1 312 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TDRD1Q9BXT4 1180 aaKnown RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TWSG1Q9GZX9 223 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ACTL8Q9H568 366 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 HAUS4Q9H6D7 363 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 AKIRIN1Q9H9L7 192 aaPredicted RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KLC4Q9NSK0 619 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PARVAQ9NVD7 372 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ATXN10Q9UBB4 475 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CPNE7Q9UBL6 633 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FAM8A1Q9UBU6 413 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PLEKHB1Q9UF11 243 aaPredicted RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SLC23A2Q9UGH3 650 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TUBD1Q9UJT1 453 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TLK1Q9UKI8 766 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PHTF1Q9UMS5 762 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SHOC2Q9UQ13 582 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TMEM184BQ9Y519 407 aaPredicted RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SVILO95425 2214 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DIDO1Q9BTC0 2240 aaKnown RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FER1L5A0AVI2 2057 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 AKAP9Q99996 3911 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 C2CD3Q4AC94 2353 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PIPSLA2A3N6 862 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LILRA5A6NI73 299 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ARGFXA6NJG6 315 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KCNK1O00180 336 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PSMD11O00231 422 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CAPN5O15484 640 aaPredicted RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FZD6O60353 706 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RFPL1O75677 317 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RNF8O76064 485 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NDUFA10O95299 355 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PRLP01236 227 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FTLP02792 175 aaPredicted RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 EBLN1P0CF75 366 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 F3P13726 295 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FERP16591 822 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DESP17661 470 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MAP4P27816 1152 aaKnown RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PBLDP30039 288 aaPredicted RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 HSPA9P38646 679 aaKnown RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GARSP41250 739 aaKnown RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CD86P42081 329 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CAPZBP47756 277 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PMS2P54278 862 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CDH6P55285 790 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DPTQ07507 201 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NSUN2Q08J23 767 aaKnown RBP eCLIP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ABHD18Q0P651 414 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KLRB1Q12918 225 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZBTB17Q13105 803 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TUBB3Q13509 450 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DNASE1L3Q13609 305 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LRP8Q14114 963 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SEPT6Q14141 434 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GPR18Q14330 331 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PCSK7Q16549 785 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CLPPQ16740 277 aaPredicted RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 QPCTQ16769 361 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 INSCQ1MX18 579 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ATP13A4Q4VNC1 1196 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZNF569Q5MCW4 686 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 HENMT1Q5T8I9 393 aaKnown RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MARC1Q5VT66 337 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PRAMEF17Q5VTA0 474 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FAM199XQ6PEV8 388 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms