RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 CCNL2Q96S94 520 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF4-202ENST00000453580 SARS2Q9NP81 518 aaKnown RBP16.92■□□□□ 0.3
TNFRSF4-202ENST00000453580 KLHL8Q9P2G9 620 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF4-202ENST00000453580 EFR3BQ9Y2G0 817 aa16.92■□□□□ 0.3
TNFRSF4-202ENST00000453580 HYOU1Q9Y4L1 999 aa16.92■□□□□ 0.3
TNFRSF4-202ENST00000453580 DUX1O43812 170 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 VEGFDO43915 354 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 PPFIA2O75334 1257 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 LIPCP11150 499 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 VCLP18206 1134 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 CD1CP29017 333 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 HMGCLP35914 325 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 LIMK2P53671 638 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 EPHA4P54764 986 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 NAP1L1P55209 391 aaKnown RBP16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 MPP3Q13368 585 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 PID1Q7Z2X4 250 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 KDELC2Q7Z4H8 507 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 AGBL5Q8NDL9 886 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 DTX3LQ8TDB6 740 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 BRSK1Q8TDC3 778 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 HTR3CQ8WXA8 447 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 SLC39A7Q92504 469 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 GLYATL1Q969I3 302 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 HAUS1Q96CS2 278 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 PPP1R2P1Q96PQ5 205 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 FCRL5Q96RD9 977 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 WDR24Q96S15 920 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 CEP41Q9BYV8 373 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 RDH14Q9HBH5 336 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 CNOT6Q9ULM6 557 aaKnown RBP16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 SHOC2Q9UQ13 582 aa16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 EPN1Q9Y6I3 576 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF4-202ENST00000453580 hCG_1818297A0A087WSY0 165 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 IGHV1OR21-1A0A087WYE8 117 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 CCDC66A2RUB6 948 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 FADS2P1A8MWK0 482 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 APOC4-APOC2K7ER74 178 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 KMOO15229 486 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 PPM1DO15297 605 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 KCNJ13O60928 360 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 PMPCBO75439 489 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 ANXA9O76027 345 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 STK10O94804 968 aaKnown RBP16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 NDUFA10O95299 355 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 MT-CYBP00156 380 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 APOC2P02655 101 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 F3P13726 295 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 HLA-DPA1P20036 260 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 CSTF2P33240 577 aaKnown RBP eCLIP16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 HHEXQ03014 270 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 C19orf57Q0VDD7 668 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 GTF2H3Q13889 308 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 TAF1BQ53T94 588 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 ARHGAP40Q5TG30 622 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 ITPRIPL1Q6GPH6 555 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 TMEM71Q6P5X7 295 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 BBS12Q6ZW61 710 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 USP53Q70EK8 1073 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 ZC3H18Q86VM9 953 aaKnown RBP16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 GPR26Q8NDV2 337 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 SLC37A2Q8TED4 501 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 PTCD2Q8WV60 388 aaKnown RBP16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 TTC25Q96NG3 672 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 FSD1LQ9BXM9 530 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 ASPSCR1Q9BZE9 553 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 ZCCHC2Q9C0B9 1178 aaKnown RBP16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 ST14Q9Y5Y6 855 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 ITPR1Q14643 2758 aa16.9■□□□□ 0.3
TNFRSF4-202ENST00000453580 IGHV5-10-1A0A0J9YXX1 117 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 LOC285095A0A1B0GVY8 99 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 BTNL10A8MVZ5 291 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 K7ENP7 123 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 ACP5P13686 325 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 CTNNA2P26232 953 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 CLN3Q13286 438 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 IYDQ6PHW0 289 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 INO80CQ6PI98 192 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 WDR74Q6RFH5 385 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 LRRTM4Q86VH4 590 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 SFTPA2Q8IWL1 248 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 ZSCAN1Q8NBB4 408 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 SPATA22Q8NHS9 363 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 QKIQ96PU8 341 aaKnown RBP eCLIP16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 VPS35Q96QK1 796 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 TAAR9Q96RI9 348 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 SEMA6CQ9H3T2 930 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 CPNE5Q9HCH3 593 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 ATXN10Q9UBB4 475 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 SAE1Q9UBE0 346 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 PKP3Q9Y446 797 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 OAS3Q9Y6K5 1087 aaKnown RBP16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 ATRXP46100 2492 aa16.89■□□□□ 0.29
TNFRSF4-202ENST00000453580 CHUKO15111 745 aa16.88■□□□□ 0.29
TNFRSF4-202ENST00000453580 CASC3O15234 703 aaKnown RBP16.88■□□□□ 0.29
TNFRSF4-202ENST00000453580 SLC4A1P02730 911 aa16.88■□□□□ 0.29
TNFRSF4-202ENST00000453580 HOXB3P14651 431 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF4-202ENST00000453580 PECAM1P16284 738 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF4-202ENST00000453580 NFKB1P19838 968 aa16.88■□□□□ 0.29
TNFRSF4-202ENST00000453580 CTNNA1P35221 906 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms