RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 KDELC1Q6UW63 502 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 USP53Q70EK8 1073 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 RAB11FIP2Q7L804 512 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 PHYKPLQ8IUZ5 450 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 SPACA3Q8IXA5 215 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 FBXO39Q8N4B4 442 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 RCBTB1Q8NDN9 531 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 ZNF248Q8NDW4 579 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 SLC37A2Q8TED4 501 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 ALG3Q92685 438 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 MRGPRX2Q96LB1 330 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 ZNF578Q96N58 590 aaPredicted RBP9.59□□□□□ -0.87
USP54-207ENST00000451492 FCRL3Q96P31 734 aaPredicted RBP9.59□□□□□ -0.87
USP54-207ENST00000451492 APOL2Q9BQE5 337 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 NUDT22Q9BRQ3 303 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 ZSCAN5AQ9BUG6 496 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 OSBPL8Q9BZF1 889 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 STRADBQ9C0K7 418 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 SEMA6CQ9H3T2 930 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 ATXN10Q9UBB4 475 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 APPL1Q9UKG1 709 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 AMFRQ9UKV5 643 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 CNOT6Q9ULM6 557 aaKnown RBP9.59□□□□□ -0.87
USP54-207ENST00000451492 DNAJC16Q9Y2G8 782 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 LOXL2Q9Y4K0 774 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 PCDHA3Q9Y5H8 950 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 KNTC1P50748 2209 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 GOLGA6L6A8MZA4 724 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 HACD1B0YJ81 288 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 PLD2O14939 933 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 PPM1DO15297 605 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 MTSS1O43312 755 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 GRID2O43424 1007 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 RBP3P10745 1247 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 PYGMP11217 842 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 PBLDP30039 288 aaPredicted RBP9.58□□□□□ -0.88
USP54-207ENST00000451492 CETN2P41208 172 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 NFATC2Q13469 925 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 SLC1A5Q15758 541 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 SNAP47Q5SQN1 464 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 BROXQ5VW32 411 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 FAM151BQ6UXP7 276 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 PEX26Q7Z412 305 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 TMC3Q7Z5M5 1100 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 PIM3Q86V86 326 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 CDKL3Q8IVW4 592 aaPredicted RBP9.58□□□□□ -0.88
USP54-207ENST00000451492 LSMEM2Q8N112 164 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 TAB3Q8N5C8 712 aaPredicted RBP9.58□□□□□ -0.88
USP54-207ENST00000451492 TRAM1L1Q8N609 369 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 CCDC110Q8TBZ0 833 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 TADA1Q96BN2 335 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 LIN37Q96GY3 246 aaPredicted RBP9.58□□□□□ -0.88
USP54-207ENST00000451492 PRR11Q96HE9 360 aaPredicted RBP9.58□□□□□ -0.88
USP54-207ENST00000451492 AHCYL2Q96HN2 611 aaKnown RBP9.58□□□□□ -0.88
USP54-207ENST00000451492 TMEM74Q96NL1 305 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 GORASP1Q9BQQ3 440 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 GBA3Q9H227 469 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 CPNE5Q9HCH3 593 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 MAGEE1Q9HCI5 957 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 KLC4Q9NSK0 619 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 KCNK4Q9NYG8 393 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.58□□□□□ -0.88
USP54-207ENST00000451492 TMEM9Q9P0T7 183 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 VPS18Q9P253 973 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 TBC1D29Q9UFV1 150 aa9.58□□□□□ -0.88
USP54-207ENST00000451492 BTNL10A8MVZ5 291 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 B4GAT1O43505 415 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 STK10O94804 968 aaKnown RBP9.57□□□□□ -0.88
USP54-207ENST00000451492 CPNE6O95741 557 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 AGTP01019 485 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 PNLIPP16233 465 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 CDC25BP30305 580 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 CSF2RBP32927 897 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 SPAM1P38567 509 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 ETV5P41161 510 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 GEMP55040 296 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 DCDC1P59894 354 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 ERVPABLB-1P60509 514 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 COPS2P61201 443 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 B4GALNT1Q00973 533 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 HHEXQ03014 270 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 TLE3Q04726 772 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 KIF5AQ12840 1032 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 MPP3Q13368 585 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 PEX6Q13608 980 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 LRP8Q14114 963 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 SPARCL1Q14515 664 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 PTPRCAPQ14761 206 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 C16orf72Q14CZ0 275 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 SLC14A2Q15849 920 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 ATP13A5Q4VNC0 1218 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 KHDC1Q4VXA5 237 aaKnown RBP9.57□□□□□ -0.88
USP54-207ENST00000451492 ANKRD20A2Q5SQ80 823 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 ARHGAP40Q5TG30 622 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 ANKRD20A1Q5TYW2 823 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 ANKRD20A3Q5VUR7 823 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 ITPRIPL1Q6GPH6 555 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 ADGRG6Q86SQ4 1221 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 LRRTM4Q86VH4 590 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 NLRP8Q86W28 1048 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms