RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 F5H423 210 aaPredicted RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 PLK4O00444 970 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 SLC9A3R1O14745 358 aaPredicted RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 SCO1O75880 301 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 SLITRK5O94991 958 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 MYL3P08590 195 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 UMPSP11172 480 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 ICAM2P13598 275 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 DNAJB1P25685 340 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 PSMB9P28065 219 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 YWHABP31946 246 aaKnown RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 SHMT1P34896 483 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 TGFBR1P36897 503 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 ST13P50502 369 aaKnown RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 PRKCDQ05655 676 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 SNTA1Q13424 505 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 STARD3Q14849 445 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 TPRG1LQ5T0D9 272 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 LAIR2Q6ISS4 152 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 ZNF517Q6ZMY9 492 aaPredicted RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 UBR3Q6ZT12 1888 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 TRMT1LQ7Z2T5 733 aaKnown RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 CACTIN-AS1Q8N1I8 211 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 MINDY1Q8N5J2 469 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 ZNF555Q8NEP9 628 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 STYXQ8WUJ0 223 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 RPL3LQ92901 407 aaKnown RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.57□□□□□ -1.041e-6■■■■■ 76.8
LSM5-208ENST00000450169 SH3KBP1Q96B97 665 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 CPB2Q96IY4 423 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 SEPHS2Q99611 448 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 UQCC2Q9BRT2 126 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 MCMBPQ9BTE3 642 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 MEAF6Q9HAF1 191 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 LIN7BQ9HAP6 207 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 ZFP14Q9HCL3 533 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 LTB4R2Q9NPC1 389 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 IARS2Q9NSE4 1012 aaKnown RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 CMTM6Q9NX76 183 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 DPP3Q9NY33 737 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 FZD1Q9UP38 647 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 SCAF8Q9UPN6 1271 aaKnown RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 AP3M1Q9Y2T2 418 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 RIPK3Q9Y572 518 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 HMX3A6NHT5 357 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 METTL15A6NJ78 407 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 PCP4L1A6NKN8 68 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 EFCAB9A8MZ26 197 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 LEUTXA8MZ59 168 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 BET1O15155 118 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 DLX3O60479 287 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 GOT2P00505 430 aaKnown RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 CFBP00751 764 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 TRAPPC2P0DI81 140 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 TRAPPC2BP0DI82 140 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 CBLP22681 906 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 C1QTNF8P60827 252 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 CAPRIN1Q14444 709 aaKnown RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 DSC3Q14574 896 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 CA9Q16790 459 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 PARP15Q460N3 678 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 DPY19L3Q6ZPD9 716 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 C15orf52Q6ZUT6 534 aaKnown RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 RBM23Q86U06 439 aaKnown RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 STK32CQ86UX6 486 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 LHFPL5Q8TAF8 219 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 MCOLN3Q8TDD5 553 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 TFAP2BQ92481 460 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 RDH12Q96NR8 316 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 RIT2Q99578 217 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 SPSB2Q99619 263 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 NUAK2Q9H093 628 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 DCSTAMPQ9H295 470 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 MUC13Q9H3R2 512 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 KAT8Q9H7Z6 458 aaKnown RBP8.57□□□□□ -1.04
LSM5-208ENST00000450169 CHST12Q9NRB3 414 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 EHD3Q9NZN3 535 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 TEKT2Q9UIF3 430 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 TLK1Q9UKI8 766 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 BTBD3Q9Y2F9 522 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 PCDHGB6Q9Y5F9 930 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 V9GYQ6 96 aa8.57□□□□□ -1.04
LSM5-208ENST00000450169 NR5A2O00482 541 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 TLL1O43897 1013 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 NPHS1O60500 1241 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 LRIG2O94898 1065 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 SNX4O95219 450 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 MED26O95402 600 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 EGFRP00533 1210 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 HPRP00739 348 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 PSKH1P11801 424 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 NCK1P16333 377 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 FSHRP23945 695 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 SLC6A2P23975 617 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 PIGAP37287 484 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 SLC26A3P40879 764 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 MAP2K4P45985 399 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 SRP54P61011 504 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms