RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 LRRC71Q8N4P6 559 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CCDC33Q8N5R6 958 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 POU5F2Q8N7G0 328 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 Q8N9G6 341 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PCSK9Q8NBP7 692 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ICA1LQ8NDH6 482 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 TSPAN14Q8NG11 270 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 OR52H1Q8NGJ2 320 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 OR52K2Q8NGK3 314 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 OR5H6Q8NGV6 325 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 RFWD2Q8NHY2 731 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 IL31RAQ8NI17 732 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 URGCPQ8TCY9 931 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 MCOLN3Q8TDD5 553 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 TCP10LQ8TDR4 215 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 IGDCC4Q8TDY8 1250 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 GDPD5Q8WTR4 605 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 U2AF1L4Q8WU68 220 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CAPSLQ8WWF8 208 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 WASF1Q92558 559 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 KRT35Q92764 455 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 SLCO2A1Q92959 643 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 RAB7BQ96AH8 199 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 SHISA4Q96DD7 197 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 C18orf8Q96DM3 657 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ARHGEF26Q96DR7 871 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 EDC3Q96F86 508 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 DCUN1D1Q96GG9 259 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZC3H10Q96K80 434 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZNF597Q96LX8 424 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 DMRTA2Q96SC8 542 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ANKRD60Q9BZ19 345 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PITPNM3Q9BZ71 974 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 OSBPL8Q9BZF1 889 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 MROH8Q9H579 483 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 LRRC19Q9H756 370 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 VPS37BQ9H9H4 285 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 LIN28AQ9H9Z2 209 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZNF556Q9HAH1 456 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 AGO4Q9HCK5 861 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 TNFRSF12AQ9NP84 129 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 SMOXQ9NWM0 555 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 COA4Q9NYJ1 87 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 VPS54Q9P1Q0 977 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ARHGAP28Q9P2N2 729 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 RIMS3Q9UJD0 308 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZFP69BQ9UJL9 534 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 BAG5Q9UL15 447 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CDC14AQ9UNH5 594 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PSMD13Q9UNM6 376 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CORO2BQ9UQ03 480 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 SIK3Q9Y2K2 1263 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 DERAQ9Y315 318 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 RNF11Q9Y3C5 154 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 DTNAQ9Y4J8 743 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 AP4S1Q9Y587 144 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 AP4B1Q9Y6B7 739 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 NFASCO94856 1347 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 FER1L6Q2WGJ9 1857 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 RIC1Q4ADV7 1423 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 EDC4Q6P2E9 1401 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 MON2Q7Z3U7 1717 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TIAM2Q8IVF5 1701 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 KIDINS220Q9ULH0 1771 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SYNJ2BP-COX16A0A087WUM0 186 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 A0A087WV62 115 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 A0A0A6YYK5 440 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PRSS51A0A1B0GVH4 220 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 hCG_1642624A0A1W2PR95 340 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM47DPA6NHR8 397 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 HMX3A6NHT5 357 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 LRRC14BA6NHZ5 514 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PRSS47A8MTI9 375 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM171A2A8MVW0 826 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 H3BMM5 538 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PSMD9O00233 223 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TAF4O00268 1085 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PDHXO00330 501 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PLK4O00444 970 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 E2F3O00716 465 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ABCD4O14678 606 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PPM1DO15297 605 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 RAD51BO15315 384 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TP73O15350 636 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PHGDHO43175 533 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 NIPSNAP2O75323 286 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PSIP1O75475 530 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TOM1L1O75674 476 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 RFPL2O75678 378 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 LYPLA2O95372 231 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PIGNO95427 931 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 NDST3O95803 873 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PTTG1O95997 202 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 GH1P01241 217 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 APOC1P02654 83 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 HPXP02790 462 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 RPLP2P05387 115 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 CAPN1P07384 714 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SRGAP2BP0DMP2 458 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms