RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 HCRTO43612 131 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 CXCL14O95715 111 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 UROSP10746 265 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 TNNI3P19429 210 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 MAGEA10P43363 369 aaPredicted RBP10.35□□□□□ -0.75
CTC1-202ENST00000449476 KIR3DL1P43629 444 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 NOVP48745 357 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 INCA1Q0VD86 236 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 MPPE1Q53F39 396 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 TRIM40Q6P9F5 258 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 PAGE2Q7Z2X7 111 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 RASAL3Q86YV0 1011 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 CBR4Q8N4T8 237 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 NAT16Q8N8M0 369 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 FUBP3Q96I24 572 aaKnown RBP eCLIP10.35□□□□□ -0.75
CTC1-202ENST00000449476 BTBD9Q96Q07 612 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 DMTF1Q9Y222 760 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 RGPD1P0DJD0 1748 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 C1QTNF3-AMACRE9PGA6 284 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 SUV39H1O43463 412 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 SPAM1P38567 509 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 FEN1P39748 380 aaKnown RBP10.35□□□□□ -0.75
CTC1-202ENST00000449476 SLC18A2Q05940 514 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 C1orf220Q5T0J3 134 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 C6orf89Q6UWU4 347 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 CHMP1BQ7LBR1 199 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 TIFAQ96CG3 184 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 MRPL48Q96GC5 212 aaKnown RBP10.35□□□□□ -0.75
CTC1-202ENST00000449476 SYT17Q9BSW7 474 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 EPB41L1Q9H4G0 881 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 ALG2Q9H553 416 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 ZNF510Q9Y2H8 683 aa10.35□□□□□ -0.75
CTC1-202ENST00000449476 ZNF142P52746 1687 aaPredicted RBP10.35□□□□□ -0.75
CTC1-202ENST00000449476 NEDD8-MDP1E9PL57 170 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 CAPN1P07384 714 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 PPIBP23284 216 aaKnown RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 CTNNB1P35222 781 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 RPIAP49247 311 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 EIF2B2P49770 351 aaKnown RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 KLF1Q13351 362 aaPredicted RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 ANGPT1Q15389 498 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 TRIQKQ629K1 86 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 R3HCC1LQ7Z5L2 792 aaKnown RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 DEPDC4Q8N2C3 294 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 ZBTB2Q8N680 514 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 SEC14L1Q92503 715 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 PEBP4Q96S96 227 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 AARSD1Q9BTE6 412 aaKnown RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 PLGRKTQ9HBL7 147 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 DNAJC11Q9NVH1 559 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 OXSMQ9NWU1 459 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 NUDT4Q9NZJ9 180 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 EIF2B4Q9UI10 523 aaKnown RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 FBXO10Q9UK96 956 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 LRP6O75581 1613 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 SEC24AO95486 1093 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 F7P08709 466 aaPredicted RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 NR2F1P10589 423 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 CYP4B1P13584 511 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 SLC6A2P23975 617 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 CDH5P33151 784 aaPredicted RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 USP39Q53GS9 565 aaKnown RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 ANXA8L1Q5VT79 327 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 BRI3BPQ8WY22 251 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 KCTD13Q8WZ19 329 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 DEFB118Q96PH6 123 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 FAIM2Q9BWQ8 316 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 ATG10Q9H0Y0 220 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 CNTN3Q9P232 1028 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 MYH6P13533 1939 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 C9IYK1 514 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 KLF11O14901 512 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 ERAL1O75616 437 aaKnown RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 STBD1O95210 358 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 TBX18O95935 607 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 HLA-DQB2P05538 268 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 OGNP20774 298 aaKnown RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 AQP1P29972 269 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 HCAR3P49019 387 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 THOP1P52888 689 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 AQP4P55087 323 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 GJA9P57773 515 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 EIF2B5Q13144 721 aaKnown RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 RGS21Q2M5E4 152 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 GATAD2AQ86YP4 633 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 PQLC3Q8N755 202 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 ZFP28Q8NHY6 868 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 WDR60Q8WVS4 1066 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 LRTOMTQ8WZ04 291 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 MYDGFQ969H8 173 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 SIGLEC10Q96LC7 697 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 TDRD1Q9BXT4 1180 aaKnown RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 XYLT2Q9H1B5 865 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 OSBPL2Q9H1P3 480 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 IGFLR1Q9H665 355 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 C8orf4Q9NR00 106 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 SAMD4AQ9UPU9 718 aaKnown RBP10.34□□□□□ -0.75
CTC1-202ENST00000449476 NCKAP1Q9Y2A7 1128 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 SCN11AQ9UI33 1791 aa10.34□□□□□ -0.75
CTC1-202ENST00000449476 PIPSLA2A3N6 862 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms