RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 FAM153AQ9UHL3 310 aa17.53■□□□□ 0.4
DDX56-207ENST00000448192 KCNK6Q9Y257 313 aa17.53■□□□□ 0.4
DDX56-207ENST00000448192 SPO11Q9Y5K1 396 aa17.53■□□□□ 0.4
DDX56-207ENST00000448192 DUSP10Q9Y6W6 482 aa17.53■□□□□ 0.4
DDX56-207ENST00000448192 AURKAO14965 403 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 GRID2O43424 1007 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 SNX2O60749 519 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 EML2O95834 649 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 BPIP17213 487 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 ITIH1P19827 911 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 CD1CP29017 333 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 MAPK10P53779 464 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 WNT3AP56704 352 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 NOMO1Q15155 1222 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 PPP2R5EQ16537 467 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 ARHGAP40Q5TG30 622 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 ZNF761Q86XN6 746 aaPredicted RBP17.52■□□□□ 0.4
DDX56-207ENST00000448192 ZNF567Q8N184 647 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 SLC25A41Q8N5S1 370 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 SLC37A2Q8TED4 501 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 HTR3CQ8WXA8 447 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 TMEM159Q96B96 161 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 QKIQ96PU8 341 aaKnown RBP eCLIP17.52■□□□□ 0.4
DDX56-207ENST00000448192 SRPK1Q96SB4 655 aaKnown RBP17.52■□□□□ 0.4
DDX56-207ENST00000448192 ZMYND15Q9H091 742 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 CARD9Q9H257 536 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 BPIFA1Q9NP55 256 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 KCNK4Q9NYG8 393 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 TBC1D29Q9UFV1 150 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 PCDHGA7Q9Y5G6 932 aa17.52■□□□□ 0.4
DDX56-207ENST00000448192 HACD1B0YJ81 288 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 H7C0C1 242 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 NUAK1O60285 661 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 ZNF8P17098 575 aaPredicted RBP17.51■□□□□ 0.39
DDX56-207ENST00000448192 ATP5OP48047 213 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 DCDC1P59894 354 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 C16orf72Q14CZ0 275 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 SIRPB2Q5JXA9 342 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 KDELC1Q6UW63 502 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 RAD9BQ6WBX8 426 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 ZNF574Q6ZN55 896 aaPredicted RBP17.51■□□□□ 0.39
DDX56-207ENST00000448192 BBS12Q6ZW61 710 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 SFRP1Q8N474 314 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 TRAM1L1Q8N609 369 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 RCBTB1Q8NDN9 531 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 GLYATL1Q969I3 302 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 VAT1Q99536 393 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 SLC38A3Q99624 504 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 C10orf88Q9H8K7 445 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 TRIM39Q9HCM9 518 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 AKAP7Q9P0M2 348 aaPredicted RBP17.51■□□□□ 0.39
DDX56-207ENST00000448192 PCDHA3Q9Y5H8 950 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 MGAQ8IWI9 3026 aa17.51■□□□□ 0.39
DDX56-207ENST00000448192 IGHV1OR21-1A0A087WYE8 117 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 IGHV5-10-1A0A0J9YXX1 117 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 TEX51A0A1B0GUA7 166 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 LOC285095A0A1B0GVY8 99 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 MACROD2A1Z1Q3 448 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 APOC4-APOC2K7ER74 178 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 APOC2P02655 101 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 FECHP22830 423 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 MPSTP25325 297 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 CTNNA1P35221 906 aaKnown RBP17.5■□□□□ 0.39
DDX56-207ENST00000448192 ETV5P41161 510 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 CHRNA4P43681 627 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 FASLGP48023 281 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 COPS2P61201 443 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 CLN3Q13286 438 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 COL9A2Q14055 689 aaPredicted RBP17.5■□□□□ 0.39
DDX56-207ENST00000448192 CLPPQ16740 277 aaPredicted RBP17.5■□□□□ 0.39
DDX56-207ENST00000448192 PDPK2PQ6A1A2 396 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 PHYKPLQ8IUZ5 450 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 ACRBPQ8NEB7 543 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 IPMKQ8NFU5 416 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 AHCYL2Q96HN2 611 aaKnown RBP17.5■□□□□ 0.39
DDX56-207ENST00000448192 OXNAD1Q96HP4 312 aaPredicted RBP17.5■□□□□ 0.39
DDX56-207ENST00000448192 CALR3Q96L12 384 aaKnown RBP17.5■□□□□ 0.39
DDX56-207ENST00000448192 MRGPRX2Q96LB1 330 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 CCDC74BQ96LY2 380 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 FCRL5Q96RD9 977 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 NFKBIL1Q9UBC1 381 aaPredicted RBP17.5■□□□□ 0.39
DDX56-207ENST00000448192 RSPH14Q9UHP6 348 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 TRHDEQ9UKU6 1024 aa17.5■□□□□ 0.39
DDX56-207ENST00000448192 REXO2Q9Y3B8 237 aaKnown RBP17.5■□□□□ 0.39
DDX56-207ENST00000448192 NVLO15381 856 aaKnown RBP17.49■□□□□ 0.39
DDX56-207ENST00000448192 MTX2O75431 263 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 RBL1P28749 1068 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 LIMK2P53671 638 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 HHEXQ03014 270 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 VAC14Q08AM6 782 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 XRCC4Q13426 336 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 NFATC2Q13469 925 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 PLA2G4EQ3MJ16 856 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 IYDQ6PHW0 289 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 CRTC3Q6UUV7 619 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 ADGRG6Q86SQ4 1221 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 KIAA1328Q86T90 577 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 GAS2L3Q86XJ1 694 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 USP7Q93009 1102 aa17.49■□□□□ 0.39
DDX56-207ENST00000448192 HERPUD2Q9BSE4 406 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms