RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 GPR158Q5T848 1215 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 PGBD2Q6P3X8 592 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 CATSPERGQ6ZRH7 1159 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 C15orf52Q6ZUT6 534 aaKnown RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 UBR7Q8N806 425 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 TSPAN18Q96SJ8 248 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 CHCHD6Q9BRQ6 235 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 IKZF4Q9H2S9 585 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 C3orf14Q9HBI5 128 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 TRPS1Q9UHF7 1281 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 PCDHGC3Q9UN70 934 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 OAS3Q9Y6K5 1087 aaKnown RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 ARHGEF28Q8N1W1 1705 aaKnown RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 H0Y858 1186 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 TNFRSF11BO00300 401 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SLC30A4O14863 429 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SLC5A3P53794 718 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 HADHBP55084 474 aaKnown RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 JAM2P57087 298 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 ARF5P84085 180 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SUZ12Q15022 739 aaKnown RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 CA9Q16790 459 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 ACSBG2Q5FVE4 666 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 RALGPS1Q5JS13 557 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 INTS6LQ5JSJ4 861 aaKnown RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF781Q8N8C0 355 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 BANPQ8N9N5 519 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SCAIQ8N9R8 606 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SOCS4Q8WXH5 440 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SPACA7Q96KW9 195 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 PHF12Q96QT6 1004 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 MRPL45Q9BRJ2 306 aaKnown RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 AARSD1Q9BTE6 412 aaKnown RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 C1QTNF1Q9BXJ1 281 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.74□□□□□ -1.179e-6■■□□□ 13.2
NEDD9-204ENST00000448183 DSN1Q9H410 356 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 KAT8Q9H7Z6 458 aaKnown RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 AGO3Q9H9G7 860 aaKnown RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SLC35C2Q9NQQ7 365 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 MRPL17Q9NRX2 175 aaKnown RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 EXD2Q9NVH0 621 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 GRHL1Q9NZI5 618 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SEC14L3Q9UDX4 400 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 CIDEBQ9UHD4 219 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 DERAQ9Y315 318 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 FADS2P1A8MWK0 482 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 TLR5O60602 858 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 STK16O75716 305 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 H6PDO95479 791 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 PCSK2P16519 638 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 NR4A1P22736 598 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 IDH3AP50213 366 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 MYBPC1Q00872 1141 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 KCNA10Q16322 511 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 CARTPTQ16568 116 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SULT1C3Q6IMI6 304 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 FBXO42Q6P3S6 717 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 DRICH1Q6PGQ1 229 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 CHSY3Q70JA7 882 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 OAFQ86UD1 273 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 SVOPLQ8N434 492 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 TRPV3Q8NET8 790 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 PJA1Q8NG27 643 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 OR4K2Q8NGD2 314 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 ELL3Q9HB65 397 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-204ENST00000448183 DNAJC11Q9NVH1 559 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 KCTD5Q9NXV2 234 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 FETUBQ9UGM5 382 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 ASF1AQ9Y294 204 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 DHRS7Q9Y394 339 aa7.74□□□□□ -1.17
NEDD9-204ENST00000448183 TRAV19A0A0A6YYK7 116 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 TBC1D3BA6NDS4 549 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF879B4DU55 563 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CILPO75339 1184 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 METTL18O95568 372 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 HOXA10P31260 410 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 RPS6KA3P51812 740 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ACTR3P61158 418 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SMAD3P84022 425 aaKnown RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 BEX3Q00994 111 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CLCQ05315 142 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ACAP2Q15057 778 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SNAPC1Q16533 368 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ALG11Q2TAA5 492 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF697Q5TEC3 545 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CLEC6AQ6EIG7 209 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 FAM171BQ6P995 826 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CERS6Q6ZMG9 384 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 KCTD8Q6ZWB6 473 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 C11orf65Q8NCR3 313 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF248Q8NDW4 579 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 HEXDCQ8WVB3 486 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 PPP1R14BQ96C90 147 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 TIFAQ96CG3 184 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 HAVCR1Q96D42 359 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CXorf40BQ96DE9 158 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 MFSD3Q96ES6 412 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 MED28Q9H204 178 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 TTYH1Q9H313 450 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 MOV10Q9HCE1 1003 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms