RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ZDHHC11BP0C7U3 371 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 CYP11B2P19099 503 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 AGAP20933 346 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 LPOP22079 712 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-205ENST00000447267 PAX3P23760 479 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 CORO1AP31146 461 aaKnown RBP4.99□□□□□ -1.61
SDCBP-205ENST00000447267 CHKAP35790 457 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 ATP5C1P36542 298 aaKnown RBP4.99□□□□□ -1.61
SDCBP-205ENST00000447267 GNL1P36915 607 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-205ENST00000447267 CA7P43166 264 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 NPTX2P47972 431 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 DGCR2P98153 550 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 MYBPHQ13203 477 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 TMEM132DQ14C87 1099 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 PPP2R5AQ15172 486 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 PFKFB3Q16875 520 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-205ENST00000447267 WDR72Q3MJ13 1102 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 MIDNQ504T8 468 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 MDH1BQ5I0G3 518 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 CERCAMQ5T4B2 595 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 MTFR2Q6P444 385 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 ABHD17CQ6PCB6 329 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 GFRALQ6UXV0 394 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 CEACAM20Q6UY09 585 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 KYAT3Q6YP21 454 aaKnown RBP4.99□□□□□ -1.61
SDCBP-205ENST00000447267 Q6ZS92 163 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 CNPY4Q8N129 248 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 OR6C4Q8NGE1 309 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 WFIKKN2Q8TEU8 576 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 THAP4Q8WY91 577 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 TSACCQ96A04 125 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-205ENST00000447267 AZIN2Q96A70 460 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 FAM131CQ96AQ9 280 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 RMND5BQ96G75 393 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-205ENST00000447267 ADOQ96SZ5 270 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 CGRRF1Q99675 332 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 SLX1AQ9BQ83 275 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 DHRS4Q9BTZ2 278 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 ULBP3Q9BZM4 244 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 ZNF518BQ9C0D4 1074 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 BHMT2Q9H2M3 363 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 ZDHHC6Q9H6R6 413 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 AKIRIN1Q9H9L7 192 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-205ENST00000447267 KCNMB3Q9NPA1 279 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 GALNT8Q9NY28 637 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 ARHGAP28Q9P2N2 729 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 CDC42EP3Q9UKI2 254 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 COQ6Q9Y2Z9 468 aa4.99□□□□□ -1.61
SDCBP-205ENST00000447267 EDDM13A0A1B0GTR0 161 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 PRAMEF25A6NGN4 478 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 PP2D1A8MPX8 630 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 GABRDO14764 452 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 CLDN3O15551 220 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 ANP32CO43423 234 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 CTAG2O75638 210 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 TOM1L1O75674 476 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 WISP2O76076 250 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 PLEKP08567 350 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-205ENST00000447267 PCSK1P29120 753 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 GNA11P29992 359 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 CSKP41240 450 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 LIFRP42702 1097 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 TUBP50607 506 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 SGSHP51688 502 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 SLC12A3P55017 1021 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 PEX3P56589 373 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 RAC3P60763 192 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 CD83Q01151 205 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 MCL1Q07820 350 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 GOLGA8FQ08AF8 430 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 GOLGA8DPQ0D2H9 430 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 FAM69BQ5VUD6 431 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 FAM199XQ6PEV8 388 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-205ENST00000447267 TMEM207Q6UWW9 146 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 DPH6Q7L8W6 267 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 CAMKMTQ7Z624 323 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 ACOT1Q86TX2 421 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 SKAP1Q86WV1 359 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 BCL6BQ8N143 479 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-205ENST00000447267 ASB15Q8WXK1 588 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 OVCA2Q8WZ82 227 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 SH3KBP1Q96B97 665 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 ZNF503Q96F45 646 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 RPL10LQ96L21 214 aaKnown RBP4.98□□□□□ -1.61
SDCBP-205ENST00000447267 Q96MF0 132 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 GPATCH1Q9BRR8 931 aaKnown RBP4.98□□□□□ -1.61
SDCBP-205ENST00000447267 DCLK3Q9C098 648 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 LRTM1Q9HBL6 345 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 OLAHQ9NV23 265 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 INTS6Q9UL03 887 aaKnown RBP4.98□□□□□ -1.61
SDCBP-205ENST00000447267 ERVW-1Q9UQF0 538 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 PCDHGA6Q9Y5G7 932 aa4.98□□□□□ -1.61
SDCBP-205ENST00000447267 MDC1Q14676 2089 aaKnown RBP4.98□□□□□ -1.61
SDCBP-205ENST00000447267 TCHHQ07283 1943 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 CCDC78A2IDD5 438 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 B4DGG1 531 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 RNF103O00237 685 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 PCDH17O14917 1159 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 SLC16A4O15374 487 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 SLC7A4O43246 635 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms