RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 FAM124AQ86V42 546 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF671Q8TAW3 534 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 BTBD9Q96Q07 612 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 DPEP2Q9H4A9 486 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF180Q9UJW8 692 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 MYRFQ9Y2G1 1151 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 IRAK3Q9Y616 596 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 WNT9AO14904 365 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ALOX15BO15296 676 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 CTPS1P17812 591 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ITPKBP27987 946 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 TTC27Q6P3X3 843 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 FBXO46Q6PJ61 603 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 MDM1Q8TC05 714 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 C8orf33Q9H7E9 229 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ZFP37Q9Y6Q3 630 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 LAMB4A4D0S4 1761 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 UGT2B17O75795 530 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 CALCAP01258 141 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 KCNE1P15382 129 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 GNAZP19086 355 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 MAGEA11P43364 429 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 TRIM16LQ309B1 348 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 DGKKQ5KSL6 1271 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 FOXR1Q6PIV2 292 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 TMPRSS11BQ86T26 416 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 CAMKVQ8NCB2 501 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 MCRS1Q96EZ8 462 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 FUCA2Q9BTY2 467 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 HPS4Q9NQG7 708 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 SPIN1Q9Y657 262 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 SLC22A3O75751 556 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 CPA2P48052 419 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 NAGLUP54802 743 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 SNX20Q7Z614 316 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 CMTR2Q8IYT2 770 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 BPIFB1Q8TDL5 484 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 ART4Q93070 314 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PCDH12Q9NPG4 1184 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PCDH10Q9P2E7 1040 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PCDHGB5Q9Y5G0 923 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 BAZ2AQ9UIF9 1905 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 ALPIP09923 528 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 GIMD1P0DJR0 217 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 HADHBP55084 474 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 COLEC12Q5KU26 742 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 CFAP206Q8IYR0 622 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 NKD2Q969F2 451 aaPredicted RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 NUS1Q96E22 293 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 C8orf48Q96LL4 319 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF354BQ96LW1 612 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 OR52E6Q96RD3 313 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 SEPHS2Q99611 448 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PPIEQ9UNP9 301 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 LYPLA1O75608 230 aaPredicted RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 SERPINA6P08185 405 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 NUDT17P0C025 328 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 HSMCR30P0CW71 290 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 LAMP2P13473 410 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PIK3CBP42338 1070 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 SCTRP47872 440 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 GRIK5Q16478 980 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 MZT2BQ6NZ67 158 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 CRTC3Q6UUV7 619 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 GDPD4Q6W3E5 623 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 OR4K2Q8NGD2 314 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 BRI3BPQ8WY22 251 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 ZBED6CLQ96FA7 236 aaPredicted RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 FAM83CQ9BQN1 747 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 LRTM1Q9HBL6 345 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 CHKBQ9Y259 395 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 TGFB1I1O43294 461 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 ONECUT3O60422 494 aaPredicted RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 BCL10O95999 233 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 UROSP10746 265 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 FAUP35544 74 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 DGKEP52429 567 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PTPN5P54829 565 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 SNTA1Q13424 505 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 RNF44Q7L0R7 432 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 NET1Q7Z628 596 aaPredicted RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PARGQ86W56 976 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 NIPA2Q8N8Q9 360 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 C1orf127Q8N9H9 656 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 FAR1Q8WVX9 515 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 CLIP3Q96DZ5 547 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 CNTN3Q9P232 1028 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 RAPGEFL1Q9UHV5 662 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 PHGDHO43175 533 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 RPL38P63173 70 aaKnown RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 MKRN4PQ13434 485 aaPredicted RBP8.49□□□□□ -1.05
PTPN3-204ENST00000446349 LCN1P1Q5VSP4 162 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 ADGRG6Q86SQ4 1221 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 NLGN2Q8NFZ4 835 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 EEF1AKMT1Q8WVE0 214 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 WDR60Q8WVS4 1066 aa8.49□□□□□ -1.05
PTPN3-204ENST00000446349 CPNE2Q96FN4 548 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms