RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 UVRAGQ9P2Y5 699 aa15.28■□□□□ 0.04
SEC13-213ENST00000445064 ATXN10Q9UBB4 475 aa15.28■□□□□ 0.04
SEC13-213ENST00000445064 KLHL3Q9UH77 587 aa15.28■□□□□ 0.04
SEC13-213ENST00000445064 IL17BQ9UHF5 180 aa15.28■□□□□ 0.04
SEC13-213ENST00000445064 HEY1Q9Y5J3 304 aa15.28■□□□□ 0.04
SEC13-213ENST00000445064 SETXQ7Z333 2677 aaKnown RBP15.28■□□□□ 0.04
SEC13-213ENST00000445064 ZFC3H1O60293 1989 aaKnown RBP15.27■□□□□ 0.04
SEC13-213ENST00000445064 RGSL1A5PLK6 1076 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 A6NCN8 305 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 GOLGA6L19H0YKK7 550 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 SUV39H1O43463 412 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 NUAK1O60285 661 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 PIRTP0C851 137 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 ZNF8P17098 575 aaPredicted RBP15.27■□□□□ 0.04
SEC13-213ENST00000445064 MC2RQ01718 297 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 MESDQ14696 234 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 ATG14Q6ZNE5 492 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 GPR26Q8NDV2 337 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 CTNNBL1Q8WYA6 563 aaPredicted RBP15.27■□□□□ 0.04
SEC13-213ENST00000445064 SH3KBP1Q96B97 665 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 RTP4Q96DX8 246 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 SPATA16Q9BXB7 569 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 TBC1D10AQ9BXI6 508 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 ADGRE3Q9BY15 652 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 CEP41Q9BYV8 373 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 SPRY4Q9C004 299 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 SLC25A18Q9H1K4 315 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 CARD9Q9H257 536 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 STN1Q9H668 368 aaKnown RBP15.27■□□□□ 0.04
SEC13-213ENST00000445064 ZFYVE1Q9HBF4 777 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 APMAPQ9HDC9 416 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 PRDM8Q9NQV8 689 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 GEMIN8Q9NWZ8 242 aaKnown RBP15.27■□□□□ 0.04
SEC13-213ENST00000445064 PILRAQ9UKJ1 303 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 SHOC2Q9UQ13 582 aa15.27■□□□□ 0.04
SEC13-213ENST00000445064 AHCTF1Q8WYP5 2266 aa15.27■□□□□ 0.03
SEC13-213ENST00000445064 PPFIA2O75334 1257 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 SLC25A14O95258 325 aaPredicted RBP15.26■□□□□ 0.03
SEC13-213ENST00000445064 F3P13726 295 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 CSRP3P50461 194 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 RAB15P59190 212 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 PPIDQ08752 370 aaKnown RBP15.26■□□□□ 0.03
SEC13-213ENST00000445064 AP1B1Q10567 949 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 ALS2CLQ60I27 953 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 BORAQ6PGQ7 559 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 B4GALNT4Q76KP1 1039 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 TIPARPQ7Z3E1 657 aaKnown RBP15.26■□□□□ 0.03
SEC13-213ENST00000445064 PLD5Q8N7P1 536 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 ZNF830Q96NB3 372 aaPredicted RBP15.26■□□□□ 0.03
SEC13-213ENST00000445064 PLEKHG4BQ96PX9 1271 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 HERPUD2Q9BSE4 406 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.26■□□□□ 0.03
SEC13-213ENST00000445064 OR2AG1Q9H205 316 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 TRIM39Q9HCM9 518 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 FBXO8Q9NRD0 319 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 KLC4Q9NSK0 619 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 CPNE7Q9UBL6 633 aa15.26■□□□□ 0.03
SEC13-213ENST00000445064 KIR2DS5A0A0G2JLQ3 304 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 A0A0G2JNG1 304 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 LOC101059948A0A1B0GTJ6 334 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 LRRD1A4D1F6 860 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 OR5K4A6NMS3 321 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 KIR2DS3K7RE56 304 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 TERTO14746 1132 aaKnown RBP15.25■□□□□ 0.03
SEC13-213ENST00000445064 NKX2-8O15522 239 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 SLC2A4P14672 509 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 HNRNPH3P31942 346 aaKnown RBP15.25■□□□□ 0.03
SEC13-213ENST00000445064 EPHA4P54764 986 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 IFI35P80217 286 aaPredicted RBP15.25■□□□□ 0.03
SEC13-213ENST00000445064 KIR2DS5Q14953 304 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 PCSK7Q16549 785 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 SLC18A3Q16572 532 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 NPNTQ6UXI9 565 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 TMC3Q7Z5M5 1100 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 ADGRG6Q86SQ4 1221 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 PTRH1Q86Y79 214 aaKnown RBP15.25■□□□□ 0.03
SEC13-213ENST00000445064 UNC5BQ8IZJ1 945 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 NLGN4XQ8N0W4 816 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 NLGN4YQ8NFZ3 816 aaPredicted RBP15.25■□□□□ 0.03
SEC13-213ENST00000445064 AGAP3Q96P47 875 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 TEFMQ96QE5 360 aaKnown RBP15.25■□□□□ 0.03
SEC13-213ENST00000445064 TRIB3Q96RU7 358 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 BRD8Q9H0E9 1235 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 OSGEPL1Q9H4B0 414 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 SCHIP1Q9P0W5 487 aaPredicted RBP15.25■□□□□ 0.03
SEC13-213ENST00000445064 SLC23A2Q9UGH3 650 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.25■□□□□ 0.03
SEC13-213ENST00000445064 ADGRG1Q9Y653 693 aa15.25■□□□□ 0.03
SEC13-213ENST00000445064 C3orf70A6NLC5 250 aaPredicted RBP15.24■□□□□ 0.03
SEC13-213ENST00000445064 ZNF891A8MT65 544 aaPredicted RBP15.24■□□□□ 0.03
SEC13-213ENST00000445064 SLC4A1P02730 911 aa15.24■□□□□ 0.03
SEC13-213ENST00000445064 MAP4P27816 1152 aaKnown RBP15.24■□□□□ 0.03
SEC13-213ENST00000445064 MAN1A1P33908 653 aa15.24■□□□□ 0.03
SEC13-213ENST00000445064 ASTE1Q2TB18 679 aaPredicted RBP15.24■□□□□ 0.03
SEC13-213ENST00000445064 PLA2G4EQ3MJ16 856 aa15.24■□□□□ 0.03
SEC13-213ENST00000445064 SLC9A4Q6AI14 798 aa15.24■□□□□ 0.03
SEC13-213ENST00000445064 CRTC3Q6UUV7 619 aa15.24■□□□□ 0.03
SEC13-213ENST00000445064 CEACAM20Q6UY09 585 aa15.24■□□□□ 0.03
SEC13-213ENST00000445064 NT5DC3Q86UY8 548 aa15.24■□□□□ 0.03
SEC13-213ENST00000445064 PHYKPLQ8IUZ5 450 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms