RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 LRATO95237 230 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 TRBC1P01850 177 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 LINC00032P0C843 101 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 CAMK1Q14012 370 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 OASLQ15646 514 aaKnown RBP11.16□□□□□ -0.62
FN1-211ENST00000443816 COLEC12Q5KU26 742 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 NEK7Q8TDX7 302 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 FNIP1Q8TF40 1166 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 NUS1Q96E22 293 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 EQTNQ9NQ60 294 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 FAM86C2PA6NEL3 165 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 MDM4O15151 490 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 TLX3O43711 291 aaPredicted RBP11.16□□□□□ -0.62
FN1-211ENST00000443816 TNFAIP8O95379 198 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 NDUFS1P28331 727 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 ARMC4Q5T2S8 1044 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 LINGO4Q6UY18 593 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 PIK3C3Q8NEB9 887 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 KLHL5Q96PQ7 755 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 CLCC1Q96S66 551 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 PTGES3LE9PB15 166 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 MATN3O15232 486 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 CLOCKO15516 846 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 DRG2P55039 364 aaKnown RBP11.16□□□□□ -0.62
FN1-211ENST00000443816 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.16□□□□□ -0.62
FN1-211ENST00000443816 DNAJB7Q7Z6W7 309 aaPredicted RBP11.16□□□□□ -0.62
FN1-211ENST00000443816 UXS1Q8NBZ7 420 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 DNASE1L2Q92874 299 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 AZIN2Q96A70 460 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 ZFRQ96KR1 1074 aaKnown RBP11.16□□□□□ -0.62
FN1-211ENST00000443816 MCCC2Q9HCC0 563 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 SNX15Q9NRS6 342 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 IKZF3Q9UKT9 509 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 PSMD13Q9UNM6 376 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 FAM237AA0A1B0GTK4 181 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 VSTM5A8MXK1 200 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 OGNP20774 298 aaKnown RBP11.16□□□□□ -0.62
FN1-211ENST00000443816 TGFBR2P37173 567 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 ECM1Q16610 540 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 WASHC2DQ5SRD0 308 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 PHF19Q5T6S3 580 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 JAZF1Q86VZ6 243 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 TNS4Q8IZW8 715 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 RASSF5Q8WWW0 418 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 ZHX1-C8orf76Q96EF9 292 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 CPXM1Q96SM3 734 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 ACP6Q9NPH0 428 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 DNAJC28Q9NX36 388 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 SEC14L3Q9UDX4 400 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 EDDM13A0A1B0GTR0 161 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 A0A1W2PRU2 124 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 OR10H3O60404 316 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 PKMP14618 531 aaKnown RBP11.16□□□□□ -0.62
FN1-211ENST00000443816 TNFRSF8P28908 595 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 STAT5AP42229 794 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 MAPK12P53778 367 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 SLC13A2Q13183 592 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 PRSS55Q6UWB4 352 aaPredicted RBP11.16□□□□□ -0.62
FN1-211ENST00000443816 SAMD14Q8IZD0 417 aaPredicted RBP11.16□□□□□ -0.62
FN1-211ENST00000443816 KCTD15Q96SI1 283 aaPredicted RBP11.16□□□□□ -0.62
FN1-211ENST00000443816 MRPS30Q9NP92 439 aaKnown RBP11.16□□□□□ -0.62
FN1-211ENST00000443816 FBXW11Q9UKB1 542 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 SUV39H1O43463 412 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 NRG3P56975 720 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 BNIP2Q12982 314 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 HEPACAMQ14CZ8 416 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 TMEM27Q9HBJ8 222 aa11.16□□□□□ -0.62
FN1-211ENST00000443816 LRRC10BA6NIK2 292 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 NRP1O14786 923 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 OR1F1O43749 312 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 SLC22A3O75751 556 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 UBOX5O94941 541 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 ZNF844Q08AG5 666 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 ZNF57Q68EA5 555 aaPredicted RBP11.15□□□□□ -0.62
FN1-211ENST00000443816 CYP2R1Q6VVX0 501 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 ZNF730Q6ZMV8 503 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 C8orf59Q8N0T1 100 aaPredicted RBP11.15□□□□□ -0.62
FN1-211ENST00000443816 SH3RF2Q8TEC5 729 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 MYDGFQ969H8 173 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 AP2A1O95782 977 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 COL6A2P12110 1019 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 TAF1AQ15573 450 aaPredicted RBP11.15□□□□□ -0.62
FN1-211ENST00000443816 LRRC55Q6ZSA7 311 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 C2orf73Q8N5S3 287 aaPredicted RBP11.15□□□□□ -0.62
FN1-211ENST00000443816 C1orf127Q8N9H9 656 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 DNAJB14Q8TBM8 379 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 MAGEE2Q8TD90 523 aaPredicted RBP11.15□□□□□ -0.62
FN1-211ENST00000443816 GGA2Q9UJY4 613 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 ERGIC3Q9Y282 383 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 CCNE2O96020 404 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 PROCP04070 461 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 C2orf80Q0P641 193 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 VPS26BQ4G0F5 336 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 UBXN11Q5T124 520 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 TMEM220Q6QAJ8 160 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 SLC26A9Q7LBE3 791 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 FAM98AQ8NCA5 519 aaKnown RBP11.15□□□□□ -0.62
FN1-211ENST00000443816 BHLHE22Q8NFJ8 381 aaPredicted RBP11.15□□□□□ -0.62
FN1-211ENST00000443816 FAR1Q8WVX9 515 aa11.15□□□□□ -0.62
FN1-211ENST00000443816 IRF7Q92985 503 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms