RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 VWA5B1Q5TIE3 1220 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 LRRC66Q68CR7 880 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 PTRHD1Q6GMV3 140 aaKnown RBP13.07□□□□□ -0.32
CPSF4-206ENST00000441580 DPY19L3Q6ZPD9 716 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 Q6ZVU0 165 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 SERPINA9Q86WD7 417 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 ZSWIM9Q86XI8 627 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 SUGP1Q8IWZ8 645 aaKnown RBP13.07□□□□□ -0.32
CPSF4-206ENST00000441580 NXPE1Q8N323 547 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 CFAP61Q8NHU2 1237 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 MAPK15Q8TD08 544 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 ACTRT2Q8TDY3 377 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 PPP2R3CQ969Q6 453 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 PBXIP1Q96AQ6 731 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 ASIC4Q96FT7 647 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 PDLIM5Q96HC4 596 aaKnown RBP13.07□□□□□ -0.32
CPSF4-206ENST00000441580 HEPHQ9BQS7 1158 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 C1QTNF3Q9BXJ4 246 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 NUF2Q9BZD4 464 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 ASB8Q9H765 288 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 MEAF6Q9HAF1 191 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 DUS2Q9NX74 493 aaKnown RBP13.07□□□□□ -0.32
CPSF4-206ENST00000441580 PKD2L2Q9NZM6 624 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 KLHL42Q9P2K6 505 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 NFKBIL1Q9UBC1 381 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-206ENST00000441580 BAIAP2L1Q9UHR4 511 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 SLC27A6Q9Y2P4 619 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 COL4A3Q01955 1670 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 UBXN8O00124 270 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 EIF3FO00303 357 aaPredicted RBP13.06□□□□□ -0.32
CPSF4-206ENST00000441580 NEMP1O14524 444 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 KLK8O60259 260 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 OR1I1O60431 355 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 ECI2O75521 394 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 CIB2O75838 187 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 SUPT7LO94864 414 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 CLDN7O95471 211 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 TSPAN12O95859 305 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 LMNAP02545 664 aaKnown RBP13.06□□□□□ -0.32
CPSF4-206ENST00000441580 S100BP04271 92 aaPredicted RBP13.06□□□□□ -0.32
CPSF4-206ENST00000441580 UGT2B4P06133 528 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 NCF2P19878 526 aaPredicted RBP13.06□□□□□ -0.32
CPSF4-206ENST00000441580 CHRM3P20309 590 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 GKP32189 559 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 VIPR1P32241 457 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 CCR10P46092 362 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 CDKN1CP49918 316 aaPredicted RBP13.06□□□□□ -0.32
CPSF4-206ENST00000441580 CLCN7P51798 805 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 DCDC1P59894 354 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 IRX1P78414 480 aaPredicted RBP13.06□□□□□ -0.32
CPSF4-206ENST00000441580 KDSRQ06136 332 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 LCP2Q13094 533 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 NAA25Q14CX7 972 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 TSNQ15631 228 aaKnown RBP13.06□□□□□ -0.32
CPSF4-206ENST00000441580 EML3Q32P44 896 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 ZNF697Q5TEC3 545 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 C6orf163Q5TEZ5 329 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 CRTC1Q6UUV9 634 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 GDPD4Q6W3E5 623 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 MACC1Q6ZN28 852 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 RINLQ6ZS11 566 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 SPRED2Q7Z698 418 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 CPSF7Q8N684 471 aaKnown RBP13.06□□□□□ -0.32
CPSF4-206ENST00000441580 PNPLA1Q8N8W4 532 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 SIDT2Q8NBJ9 832 aaKnown RBP13.06□□□□□ -0.32
CPSF4-206ENST00000441580 FAM13CQ8NE31 585 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 GIMAP7Q8NHV1 300 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 HCAR2Q8TDS4 363 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 EID2BQ96D98 161 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 PHF21BQ96EK2 531 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 ZSWIM3Q96MP5 696 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 PANX3Q96QZ0 392 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 OR52B2Q96RD2 323 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 CADM1Q9BY67 442 aaKnown RBP13.06□□□□□ -0.32
CPSF4-206ENST00000441580 ZNF385DQ9H6B1 395 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 IL26Q9NPH9 171 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 TAS2R1Q9NYW7 299 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 FBXO10Q9UK96 956 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 DHRS7Q9Y394 339 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 PLXNA2O75051 1894 aa13.06□□□□□ -0.32
CPSF4-206ENST00000441580 AGAP14A8MT82 685 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 UPK3BL1B0FP48 263 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 B2RBV5 119 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 UPK3BL2E5RIL1 263 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 SDHDO14521 159 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 PER2O15055 1255 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 CHUKO15111 745 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 GSC2O15499 205 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 DCXO43602 365 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 BNIP3LO60238 219 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 SNX2O60749 519 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 MLYCDO95822 493 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 MTHFD2P13995 350 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 HNRNPLP14866 589 aaKnown RBP eCLIP13.05□□□□□ -0.32
CPSF4-206ENST00000441580 NSG1P42857 185 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 CPA2P48052 419 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 RAP1GDS1P52306 607 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 ST8SIA6P61647 398 aa13.05□□□□□ -0.32
CPSF4-206ENST00000441580 KLF10Q13118 480 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms