RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 SCN8AQ9UQD0 1980 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 NTN3O00634 580 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-210ENST00000441135 CEP104O60308 925 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 PIRTP0C851 137 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 GLB1P16278 677 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 CHRNA4P43681 627 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 ERVPABLB-1P60509 514 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 PEX6Q13608 980 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 CERCAMQ5T4B2 595 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 IGF2-ASQ6U949 168 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 SLC35F6Q8N357 371 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 TRAM1L1Q8N609 369 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 GPBAR1Q8TDU6 330 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 C1orf54Q8WWF1 131 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 NAP1L3Q99457 506 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-210ENST00000441135 LRRC40Q9H9A6 602 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 THSD1Q9NS62 852 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 VPS18Q9P253 973 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 ZNF148Q9UQR1 794 aa18.07■□□□□ 0.48
SMPD4-210ENST00000441135 ASXL3Q9C0F0 2248 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 ADAMTS20P59510 1910 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 B4DGG1 531 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 D6RAR5 112 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 F5H423 210 aaPredicted RBP18.06■□□□□ 0.48
SMPD4-210ENST00000441135 NOBOXO60393 691 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 METTL18O95568 372 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 AP2A1O95782 977 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 AGTP01019 485 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 PNLIPP16233 465 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 FDFT1P37268 417 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 MLLT3P42568 568 aaPredicted RBP18.06■□□□□ 0.48
SMPD4-210ENST00000441135 PCBP4P57723 403 aaKnown RBP18.06■□□□□ 0.48
SMPD4-210ENST00000441135 LONRF2Q1L5Z9 754 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 C14orf28Q4W4Y0 310 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 C3orf38Q5JPI3 329 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 C4orf22Q6V702 233 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 GLT6D1Q7Z4J2 308 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 SLC25A41Q8N5S1 370 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 ZNF248Q8NDW4 579 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 GFM1Q96RP9 751 aaKnown RBP18.06■□□□□ 0.48
SMPD4-210ENST00000441135 TBL1YQ9BQ87 522 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 DPEP2Q9H4A9 486 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 KCND1Q9NSA2 647 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 TRMT1Q9NXH9 659 aaKnown RBP18.06■□□□□ 0.48
SMPD4-210ENST00000441135 IL17CQ9P0M4 197 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 APPL1Q9UKG1 709 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 SUFUQ9UMX1 484 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 SATB2Q9UPW6 733 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 PCDHGA8Q9Y5G5 932 aa18.06■□□□□ 0.48
SMPD4-210ENST00000441135 CACNA1GO43497 2377 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 CELSR3Q9NYQ7 3312 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 TMX2-CTNND1H3BSU7 103 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 NUDT21O43809 227 aaKnown RBP18.05■□□□□ 0.48
SMPD4-210ENST00000441135 RPLP0P05388 317 aaKnown RBP18.05■□□□□ 0.48
SMPD4-210ENST00000441135 BPIP17213 487 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 RBMS1P29558 406 aaKnown RBP18.05■□□□□ 0.48
SMPD4-210ENST00000441135 CXCR5P32302 372 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 GNPDA1P46926 289 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 PDX1P52945 283 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 PDE1BQ01064 536 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 MSLNQ13421 630 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-210ENST00000441135 HLTFQ14527 1009 aaKnown RBP eCLIP18.05■□□□□ 0.48
SMPD4-210ENST00000441135 TAF1AQ15573 450 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-210ENST00000441135 DENND5AQ6IQ26 1287 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 CCNJLQ8IV13 435 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 GPR26Q8NDV2 337 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 CCL4L1Q8NHW4 92 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 WDR36Q8NI36 951 aaKnown RBP18.05■□□□□ 0.48
SMPD4-210ENST00000441135 BRSK1Q8TDC3 778 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 BLOC1S5Q8TDH9 187 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 AGAP2Q99490 1192 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 SUDS3Q9H7L9 328 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-210ENST00000441135 RMI1Q9H9A7 625 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 ASCL3Q9NQ33 180 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 PAK5Q9P286 719 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 RABGEF1Q9UJ41 708 aa18.05■□□□□ 0.48
SMPD4-210ENST00000441135 CNOT6Q9ULM6 557 aaKnown RBP18.05■□□□□ 0.48
SMPD4-210ENST00000441135 NBEAQ8NFP9 2946 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 CCDC187A0A096LP49 1063 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 FADS2P1A8MWK0 482 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 GPR89AB7ZAQ6 455 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 AURKAO14965 403 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 ATP1A1P05023 1023 aaKnown RBP18.04■□□□□ 0.48
SMPD4-210ENST00000441135 GPR89BP0CG08 455 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 EIF3IQ13347 325 aaKnown RBP18.04■□□□□ 0.48
SMPD4-210ENST00000441135 LINC00523Q86TU6 105 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 CCDC89Q8N998 374 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 ACTRT1Q8TDG2 376 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 LIN37Q96GY3 246 aaPredicted RBP18.04■□□□□ 0.48
SMPD4-210ENST00000441135 VPS35Q96QK1 796 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 OSBPL9Q96SU4 736 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 SPATA16Q9BXB7 569 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 LRRN3Q9H3W5 708 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 TAAR2Q9P1P5 351 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 PYCARDQ9ULZ3 195 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 SNX12Q9UMY4 172 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 PKP3Q9Y446 797 aa18.04■□□□□ 0.48
SMPD4-210ENST00000441135 COL27A1Q8IZC6 1860 aaPredicted RBP18.03■□□□□ 0.48
SMPD4-210ENST00000441135 A0A1W2PQM1 296 aa18.03■□□□□ 0.48
SMPD4-210ENST00000441135 C2orf81A6NN90 581 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms