RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 IL26Q9NPH9 171 aa23.41■■□□□ 1.34
VARS-217ENST00000440048 TMPRSS11EQ9UL52 423 aa23.41■■□□□ 1.34
VARS-217ENST00000440048 UNC13CQ8NB66 2214 aa23.41■■□□□ 1.34
VARS-217ENST00000440048 URB1O60287 2271 aaKnown RBP23.4■■□□□ 1.34
VARS-217ENST00000440048 NUAK1O60285 661 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 GLB1P16278 677 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 ZNF8P17098 575 aaPredicted RBP23.4■■□□□ 1.34
VARS-217ENST00000440048 STIP1P31948 543 aaKnown RBP23.4■■□□□ 1.34
VARS-217ENST00000440048 SPAM1P38567 509 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 MSLNQ13421 630 aaPredicted RBP23.4■■□□□ 1.34
VARS-217ENST00000440048 SNX1Q13596 522 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 LRP8Q14114 963 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 SIX1Q15475 284 aaPredicted RBP23.4■■□□□ 1.34
VARS-217ENST00000440048 ATP13A5Q4VNC0 1218 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 CERCAMQ5T4B2 595 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 KCTD11Q693B1 232 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 ADGRG6Q86SQ4 1221 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 C17orf82Q86X59 251 aaPredicted RBP23.4■■□□□ 1.34
VARS-217ENST00000440048 PHYKPLQ8IUZ5 450 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 MDM1Q8TC05 714 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 DEPDC7Q96QD5 511 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 VPS35Q96QK1 796 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 PKP3Q9Y446 797 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 ARL5AQ9Y689 179 aa23.4■■□□□ 1.34
VARS-217ENST00000440048 STX7O15400 261 aaKnown RBP23.39■■□□□ 1.33
VARS-217ENST00000440048 MAZP56270 477 aaKnown RBP23.39■■□□□ 1.33
VARS-217ENST00000440048 PEX6Q13608 980 aa23.39■■□□□ 1.33
VARS-217ENST00000440048 PTPRCAPQ14761 206 aa23.39■■□□□ 1.33
VARS-217ENST00000440048 TAF1AQ15573 450 aaPredicted RBP23.39■■□□□ 1.33
VARS-217ENST00000440048 P3H1Q32P28 736 aa23.39■■□□□ 1.33
VARS-217ENST00000440048 CHST15Q7LFX5 561 aaPredicted RBP23.39■■□□□ 1.33
VARS-217ENST00000440048 TAB3Q8N5C8 712 aaPredicted RBP23.39■■□□□ 1.33
VARS-217ENST00000440048 DTX3LQ8TDB6 740 aa23.39■■□□□ 1.33
VARS-217ENST00000440048 LRRC45Q96CN5 670 aa23.39■■□□□ 1.33
VARS-217ENST00000440048 KCNF1Q9H3M0 494 aa23.39■■□□□ 1.33
VARS-217ENST00000440048 ARNT2Q9HBZ2 717 aa23.39■■□□□ 1.33
VARS-217ENST00000440048 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.39■■□□□ 1.33
VARS-217ENST00000440048 ZNF148Q9UQR1 794 aa23.39■■□□□ 1.33
VARS-217ENST00000440048 RNF215Q9Y6U7 377 aa23.39■■□□□ 1.33
VARS-217ENST00000440048 ZNF106Q9H2Y7 1883 aaKnown RBP23.39■■□□□ 1.33
VARS-217ENST00000440048 C2orf81A6NN90 581 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 SRRM3A6NNA2 597 aaPredicted RBP23.38■■□□□ 1.33
VARS-217ENST00000440048 GRID2O43424 1007 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 PPFIA2O75334 1257 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 CSO75390 466 aaKnown RBP23.38■■□□□ 1.33
VARS-217ENST00000440048 ECEL1O95672 775 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 LPOP22079 712 aaPredicted RBP23.38■■□□□ 1.33
VARS-217ENST00000440048 CYP4F3Q08477 520 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 CHRNA6Q15825 494 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 KHDC1Q4VXA5 237 aaKnown RBP23.38■■□□□ 1.33
VARS-217ENST00000440048 FAM151BQ6UXP7 276 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 PROSER1Q86XN7 944 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 REXO1L1PQ8IX06 675 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 NAGSQ8N159 534 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 WDR48Q8TAF3 677 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 BRSK1Q8TDC3 778 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 PATE1Q8WXA2 126 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 SYNDIG1Q9H7V2 258 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 LRIT1Q9P2V4 623 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 DKK4Q9UBT3 224 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 FEZ2Q9UHY8 353 aaPredicted RBP23.38■■□□□ 1.33
VARS-217ENST00000440048 APPL1Q9UKG1 709 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 KCTD3Q9Y597 815 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 PCDHB1Q9Y5F3 818 aa23.38■■□□□ 1.33
VARS-217ENST00000440048 GLYATL1P3A0A0U1RQE8 302 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 GPR89AB7ZAQ6 455 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 NTN3O00634 580 aaPredicted RBP23.37■■□□□ 1.33
VARS-217ENST00000440048 GAPDHSO14556 408 aaPredicted RBP23.37■■□□□ 1.33
VARS-217ENST00000440048 NUDT21O43809 227 aaKnown RBP23.37■■□□□ 1.33
VARS-217ENST00000440048 CEP104O60308 925 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 MTX2O75431 263 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 TCEA3O75764 348 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 FGGP02679 453 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 GPR89BP0CG08 455 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 ACP5P13686 325 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 CXCR5P32302 372 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 CCL7P80098 99 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 RBM44Q6ZP01 1051 aaKnown RBP23.37■■□□□ 1.33
VARS-217ENST00000440048 ARL14Q8N4G2 192 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 OR4K2Q8NGD2 314 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 NRSN2Q9GZP1 204 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 LRRC40Q9H9A6 602 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 KCNK6Q9Y257 313 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 ZFYVE26Q68DK2 2539 aa23.37■■□□□ 1.33
VARS-217ENST00000440048 CHUKO15111 745 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 GPR39O43194 453 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 PSMD3O43242 534 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 VEGFDO43915 354 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 UGT1A9O60656 530 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 AP2A1O95782 977 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 IFNB1P01574 187 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 PNLIPP16233 465 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 UGT1A6P19224 532 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 UGT1A1P22309 533 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 UGT1A4P22310 534 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 CA5AP35218 305 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 UGT1A3P35503 534 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 UGT1A5P35504 534 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 SPIDRQ14159 915 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 CCNG2Q16589 344 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms